sph_harm.txx 102 KB

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  1. #include SCTL_INCLUDE(legendre_rule.hpp)
  2. // TODO: Replace work vectors with dynamic-arrays
  3. namespace SCTL_NAMESPACE {
  4. template <class Real> void SphericalHarmonics<Real>::Grid2SHC(const Vector<Real>& X, Long Nt, Long Np, Long p1, Vector<Real>& S, SHCArrange arrange){
  5. Long N = X.Dim() / (Np*Nt);
  6. assert(X.Dim() == N*Np*Nt);
  7. Vector<Real> B1(N*(p1+1)*(p1+1));
  8. Grid2SHC_(X, Nt, Np, p1, B1);
  9. SHCArrange0(B1, p1, S, arrange);
  10. }
  11. template <class Real> void SphericalHarmonics<Real>::SHC2Grid(const Vector<Real>& S, SHCArrange arrange, Long p0, Long Nt, Long Np, Vector<Real>* X, Vector<Real>* X_theta, Vector<Real>* X_phi){
  12. Vector<Real> B0;
  13. SHCArrange1(S, arrange, p0, B0);
  14. SHC2Grid_(B0, p0, Nt, Np, X, X_phi, X_theta);
  15. }
  16. template <class Real> void SphericalHarmonics<Real>::SHCEval(const Vector<Real>& S, SHCArrange arrange, Long p0, const Vector<Real>& cos_theta_phi, Vector<Real>& X) {
  17. Long M = (p0+1) * (p0+1);
  18. Long dof;
  19. Matrix<Real> B1;
  20. { // Set B1, dof
  21. Vector<Real> B0;
  22. SHCArrange1(S, arrange, p0, B0);
  23. dof = B0.Dim() / M;
  24. assert(B0.Dim() == dof * M);
  25. B1.ReInit(dof, M);
  26. Vector<Real> B1_(B1.Dim(0) * B1.Dim(1), B1.begin(), false);
  27. SHCArrange0(B0, p0, B1_, SHCArrange::COL_MAJOR_NONZERO);
  28. }
  29. assert(B1.Dim(0) == dof);
  30. assert(B1.Dim(1) == M);
  31. Matrix<Real> SHBasis;
  32. SHBasisEval(p0, cos_theta_phi, SHBasis);
  33. assert(SHBasis.Dim(1) == M);
  34. Long N = SHBasis.Dim(0);
  35. { // Set X
  36. if (X.Dim() != N*dof) X.ReInit(N * dof);
  37. for (Long k0 = 0; k0 < N; k0++) {
  38. for (Long k1 = 0; k1 < dof; k1++) {
  39. Real X_ = 0;
  40. for (Long i = 0; i < M; i++) X_ += B1[k1][i] * SHBasis[k0][i];
  41. X[k0 * dof + k1] = X_;
  42. }
  43. }
  44. }
  45. }
  46. template <class Real> void SphericalHarmonics<Real>::SHC2Pole(const Vector<Real>& S, SHCArrange arrange, Long p0, Vector<Real>& P){
  47. Vector<Real> QP[2];
  48. { // Set QP // TODO: store these weights
  49. Vector<Real> x(1), alp;
  50. const Real SQRT2PI = sqrt<Real>(4 * const_pi<Real>());
  51. for (Long i = 0; i < 2; i++) {
  52. x = (i ? -1 : 1);
  53. LegPoly(alp, x, p0);
  54. QP[i].ReInit(p0 + 1, alp.begin());
  55. QP[i] *= SQRT2PI;
  56. }
  57. }
  58. Long M, N;
  59. { // Set M, N
  60. M = 0;
  61. if (arrange == SHCArrange::ALL) M = 2*(p0+1)*(p0+1);
  62. if (arrange == SHCArrange::ROW_MAJOR) M = (p0+1)*(p0+2);
  63. if (arrange == SHCArrange::COL_MAJOR_NONZERO) M = (p0+1)*(p0+1);
  64. if (M == 0) return;
  65. N = S.Dim() / M;
  66. assert(S.Dim() == N * M);
  67. }
  68. if(P.Dim() != N * 2) P.ReInit(N * 2);
  69. if (arrange == SHCArrange::ALL) {
  70. #pragma omp parallel
  71. { // Compute pole
  72. Integer tid = omp_get_thread_num();
  73. Integer omp_p = omp_get_num_threads();
  74. Long a = (tid + 0) * N / omp_p;
  75. Long b = (tid + 1) * N / omp_p;
  76. for (Long i = a; i < b; i++) {
  77. Real P_[2] = {0, 0};
  78. for (Long j = 0; j < p0 + 1; j++) {
  79. P_[0] += S[i*M + j*(p0+1)*2] * QP[0][j];
  80. P_[1] += S[i*M + j*(p0+1)*2] * QP[1][j];
  81. }
  82. P[2*i+0] = P_[0];
  83. P[2*i+1] = P_[1];
  84. }
  85. }
  86. }
  87. if (arrange == SHCArrange::ROW_MAJOR) {
  88. #pragma omp parallel
  89. { // Compute pole
  90. Integer tid = omp_get_thread_num();
  91. Integer omp_p = omp_get_num_threads();
  92. Long a = (tid + 0) * N / omp_p;
  93. Long b = (tid + 1) * N / omp_p;
  94. for (Long i = a; i < b; i++) {
  95. Long idx = 0;
  96. Real P_[2] = {0, 0};
  97. for (Long j = 0; j < p0 + 1; j++) {
  98. P_[0] += S[i*M+idx] * QP[0][j];
  99. P_[1] += S[i*M+idx] * QP[1][j];
  100. idx += 2*(j+1);
  101. }
  102. P[2*i+0] = P_[0];
  103. P[2*i+1] = P_[1];
  104. }
  105. }
  106. }
  107. if (arrange == SHCArrange::COL_MAJOR_NONZERO) {
  108. #pragma omp parallel
  109. { // Compute pole
  110. Integer tid = omp_get_thread_num();
  111. Integer omp_p = omp_get_num_threads();
  112. Long a = (tid + 0) * N / omp_p;
  113. Long b = (tid + 1) * N / omp_p;
  114. for (Long i = a; i < b; i++) {
  115. Real P_[2] = {0, 0};
  116. for (Long j = 0; j < p0 + 1; j++) {
  117. P_[0] += S[i*M+j] * QP[0][j];
  118. P_[1] += S[i*M+j] * QP[1][j];
  119. }
  120. P[2*i+0] = P_[0];
  121. P[2*i+1] = P_[1];
  122. }
  123. }
  124. }
  125. }
  126. template <class Real> void SphericalHarmonics<Real>::WriteVTK(const char* fname, const Vector<Real>* S, const Vector<Real>* v_ptr, SHCArrange arrange, Long p0, Long p1, Real period, const Comm& comm){
  127. typedef double VTKReal;
  128. Vector<Real> SS;
  129. if (S == nullptr) {
  130. Integer p = 2;
  131. Integer Ncoeff = (p + 1) * (p + 1);
  132. Vector<Real> SSS(COORD_DIM * Ncoeff), SSS_grid;
  133. SSS.SetZero();
  134. SSS[1+0*p+0*Ncoeff] = sqrt<Real>(2.0)/sqrt<Real>(3.0);
  135. SSS[1+1*p+1*Ncoeff] = 1/sqrt<Real>(3.0);
  136. SSS[1+2*p+2*Ncoeff] = 1/sqrt<Real>(3.0);
  137. SphericalHarmonics<Real>::SHC2Grid(SSS, SHCArrange::COL_MAJOR_NONZERO, p, p+1, 2*p+2, &SSS_grid);
  138. SphericalHarmonics<Real>::Grid2SHC(SSS_grid, p+1, 2*p+2, p0, SS, arrange);
  139. S = &SS;
  140. }
  141. Vector<Real> X, Xp, V, Vp;
  142. { // Upsample X
  143. const Vector<Real>& X0=*S;
  144. SphericalHarmonics<Real>::SHC2Grid(X0, arrange, p0, p1+1, 2*p1, &X);
  145. SphericalHarmonics<Real>::SHC2Pole(X0, arrange, p0, Xp);
  146. }
  147. if(v_ptr){ // Upsample V
  148. const Vector<Real>& X0=*v_ptr;
  149. SphericalHarmonics<Real>::SHC2Grid(X0, arrange, p0, p1+1, 2*p1, &V);
  150. SphericalHarmonics<Real>::SHC2Pole(X0, arrange, p0, Vp);
  151. }
  152. std::vector<VTKReal> point_coord;
  153. std::vector<VTKReal> point_value;
  154. std::vector<int32_t> poly_connect;
  155. std::vector<int32_t> poly_offset;
  156. { // Set point_coord, point_value, poly_connect
  157. Long N_ves = X.Dim()/(2*p1*(p1+1)*COORD_DIM); // Number of vesicles
  158. assert(Xp.Dim() == N_ves*2*COORD_DIM);
  159. for(Long k=0;k<N_ves;k++){ // Set point_coord
  160. Real C[COORD_DIM]={0,0,0};
  161. if(period>0){
  162. for(Integer l=0;l<COORD_DIM;l++) C[l]=0;
  163. for(Long i=0;i<p1+1;i++){
  164. for(Long j=0;j<2*p1;j++){
  165. for(Integer l=0;l<COORD_DIM;l++){
  166. C[l]+=X[j+2*p1*(i+(p1+1)*(l+k*COORD_DIM))];
  167. }
  168. }
  169. }
  170. for(Integer l=0;l<COORD_DIM;l++) C[l]+=Xp[0+2*(l+k*COORD_DIM)];
  171. for(Integer l=0;l<COORD_DIM;l++) C[l]+=Xp[1+2*(l+k*COORD_DIM)];
  172. for(Integer l=0;l<COORD_DIM;l++) C[l]/=2*p1*(p1+1)+2;
  173. for(Integer l=0;l<COORD_DIM;l++) C[l]=(round(C[l]/period))*period;
  174. }
  175. for(Long i=0;i<p1+1;i++){
  176. for(Long j=0;j<2*p1;j++){
  177. for(Integer l=0;l<COORD_DIM;l++){
  178. point_coord.push_back(X[j+2*p1*(i+(p1+1)*(l+k*COORD_DIM))]-C[l]);
  179. }
  180. }
  181. }
  182. for(Integer l=0;l<COORD_DIM;l++) point_coord.push_back(Xp[0+2*(l+k*COORD_DIM)]-C[l]);
  183. for(Integer l=0;l<COORD_DIM;l++) point_coord.push_back(Xp[1+2*(l+k*COORD_DIM)]-C[l]);
  184. }
  185. if(v_ptr) {
  186. Long data__dof = V.Dim() / (2*p1*(p1+1));
  187. for(Long k=0;k<N_ves;k++){ // Set point_value
  188. for(Long i=0;i<p1+1;i++){
  189. for(Long j=0;j<2*p1;j++){
  190. for(Long l=0;l<data__dof;l++){
  191. point_value.push_back(V[j+2*p1*(i+(p1+1)*(l+k*data__dof))]);
  192. }
  193. }
  194. }
  195. for(Long l=0;l<data__dof;l++) point_value.push_back(Vp[0+2*(l+k*data__dof)]);
  196. for(Long l=0;l<data__dof;l++) point_value.push_back(Vp[1+2*(l+k*data__dof)]);
  197. }
  198. }
  199. for(Long k=0;k<N_ves;k++){
  200. for(Long j=0;j<2*p1;j++){
  201. Long i0= 0;
  202. Long i1=p1;
  203. Long j0=((j+0) );
  204. Long j1=((j+1)%(2*p1));
  205. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*(p1+1)+0);
  206. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i0+j0);
  207. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i0+j1);
  208. poly_offset.push_back(poly_connect.size());
  209. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*(p1+1)+1);
  210. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i1+j0);
  211. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i1+j1);
  212. poly_offset.push_back(poly_connect.size());
  213. }
  214. for(Long i=0;i<p1;i++){
  215. for(Long j=0;j<2*p1;j++){
  216. Long i0=((i+0) );
  217. Long i1=((i+1) );
  218. Long j0=((j+0) );
  219. Long j1=((j+1)%(2*p1));
  220. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i0+j0);
  221. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i1+j0);
  222. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i1+j1);
  223. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i0+j1);
  224. poly_offset.push_back(poly_connect.size());
  225. }
  226. }
  227. }
  228. }
  229. Integer np = comm.Size();
  230. Integer myrank = comm.Rank();
  231. std::vector<VTKReal>& coord=point_coord;
  232. std::vector<VTKReal>& value=point_value;
  233. std::vector<int32_t>& connect=poly_connect;
  234. std::vector<int32_t>& offset=poly_offset;
  235. Long pt_cnt=coord.size()/COORD_DIM;
  236. Long poly_cnt=poly_offset.size();
  237. // Open file for writing.
  238. std::stringstream vtufname;
  239. vtufname<<fname<<"_"<<std::setfill('0')<<std::setw(6)<<myrank<<".vtp";
  240. std::ofstream vtufile;
  241. vtufile.open(vtufname.str().c_str());
  242. if(vtufile.fail()) return;
  243. bool isLittleEndian;
  244. { // Set isLittleEndian
  245. uint16_t number = 0x1;
  246. uint8_t *numPtr = (uint8_t*)&number;
  247. isLittleEndian=(numPtr[0] == 1);
  248. }
  249. // Proceed to write to file.
  250. Long data_size=0;
  251. vtufile<<"<?xml version=\"1.0\"?>\n";
  252. if(isLittleEndian) vtufile<<"<VTKFile type=\"PolyData\" version=\"0.1\" byte_order=\"LittleEndian\">\n";
  253. else vtufile<<"<VTKFile type=\"PolyData\" version=\"0.1\" byte_order=\"BigEndian\">\n";
  254. //===========================================================================
  255. vtufile<<" <PolyData>\n";
  256. vtufile<<" <Piece NumberOfPoints=\""<<pt_cnt<<"\" NumberOfVerts=\"0\" NumberOfLines=\"0\" NumberOfStrips=\"0\" NumberOfPolys=\""<<poly_cnt<<"\">\n";
  257. //---------------------------------------------------------------------------
  258. vtufile<<" <Points>\n";
  259. vtufile<<" <DataArray type=\"Float"<<sizeof(VTKReal)*8<<"\" NumberOfComponents=\""<<COORD_DIM<<"\" Name=\"Position\" format=\"appended\" offset=\""<<data_size<<"\" />\n";
  260. data_size+=sizeof(uint32_t)+coord.size()*sizeof(VTKReal);
  261. vtufile<<" </Points>\n";
  262. //---------------------------------------------------------------------------
  263. if(value.size()){ // value
  264. vtufile<<" <PointData>\n";
  265. vtufile<<" <DataArray type=\"Float"<<sizeof(VTKReal)*8<<"\" NumberOfComponents=\""<<value.size()/pt_cnt<<"\" Name=\""<<"value"<<"\" format=\"appended\" offset=\""<<data_size<<"\" />\n";
  266. data_size+=sizeof(uint32_t)+value.size()*sizeof(VTKReal);
  267. vtufile<<" </PointData>\n";
  268. }
  269. //---------------------------------------------------------------------------
  270. vtufile<<" <Polys>\n";
  271. vtufile<<" <DataArray type=\"Int32\" Name=\"connectivity\" format=\"appended\" offset=\""<<data_size<<"\" />\n";
  272. data_size+=sizeof(uint32_t)+connect.size()*sizeof(int32_t);
  273. vtufile<<" <DataArray type=\"Int32\" Name=\"offsets\" format=\"appended\" offset=\""<<data_size<<"\" />\n";
  274. data_size+=sizeof(uint32_t)+offset.size() *sizeof(int32_t);
  275. vtufile<<" </Polys>\n";
  276. //---------------------------------------------------------------------------
  277. vtufile<<" </Piece>\n";
  278. vtufile<<" </PolyData>\n";
  279. //===========================================================================
  280. vtufile<<" <AppendedData encoding=\"raw\">\n";
  281. vtufile<<" _";
  282. int32_t block_size;
  283. block_size=coord.size()*sizeof(VTKReal); vtufile.write((char*)&block_size, sizeof(int32_t)); vtufile.write((char*)&coord [0], coord.size()*sizeof(VTKReal));
  284. if(value.size()){ // value
  285. block_size=value.size()*sizeof(VTKReal); vtufile.write((char*)&block_size, sizeof(int32_t)); vtufile.write((char*)&value [0], value.size()*sizeof(VTKReal));
  286. }
  287. block_size=connect.size()*sizeof(int32_t); vtufile.write((char*)&block_size, sizeof(int32_t)); vtufile.write((char*)&connect[0], connect.size()*sizeof(int32_t));
  288. block_size=offset .size()*sizeof(int32_t); vtufile.write((char*)&block_size, sizeof(int32_t)); vtufile.write((char*)&offset [0], offset .size()*sizeof(int32_t));
  289. vtufile<<"\n";
  290. vtufile<<" </AppendedData>\n";
  291. //===========================================================================
  292. vtufile<<"</VTKFile>\n";
  293. vtufile.close();
  294. if(myrank) return;
  295. std::stringstream pvtufname;
  296. pvtufname<<fname<<".pvtp";
  297. std::ofstream pvtufile;
  298. pvtufile.open(pvtufname.str().c_str());
  299. if(pvtufile.fail()) return;
  300. pvtufile<<"<?xml version=\"1.0\"?>\n";
  301. pvtufile<<"<VTKFile type=\"PPolyData\">\n";
  302. pvtufile<<" <PPolyData GhostLevel=\"0\">\n";
  303. pvtufile<<" <PPoints>\n";
  304. pvtufile<<" <PDataArray type=\"Float"<<sizeof(VTKReal)*8<<"\" NumberOfComponents=\""<<COORD_DIM<<"\" Name=\"Position\"/>\n";
  305. pvtufile<<" </PPoints>\n";
  306. if(value.size()){ // value
  307. pvtufile<<" <PPointData>\n";
  308. pvtufile<<" <PDataArray type=\"Float"<<sizeof(VTKReal)*8<<"\" NumberOfComponents=\""<<value.size()/pt_cnt<<"\" Name=\""<<"value"<<"\"/>\n";
  309. pvtufile<<" </PPointData>\n";
  310. }
  311. {
  312. // Extract filename from path.
  313. std::stringstream vtupath;
  314. vtupath<<'/'<<fname;
  315. std::string pathname = vtupath.str();
  316. auto found = pathname.find_last_of("/\\");
  317. std::string fname_ = pathname.substr(found+1);
  318. for(Integer i=0;i<np;i++) pvtufile<<" <Piece Source=\""<<fname_<<"_"<<std::setfill('0')<<std::setw(6)<<i<<".vtp\"/>\n";
  319. }
  320. pvtufile<<" </PPolyData>\n";
  321. pvtufile<<"</VTKFile>\n";
  322. pvtufile.close();
  323. }
  324. template <class Real> void SphericalHarmonics<Real>::Grid2VecSHC(const Vector<Real>& X, Long Nt, Long Np, Long p0, Vector<Real>& S, SHCArrange arrange) {
  325. Long N = X.Dim() / (Np*Nt);
  326. assert(X.Dim() == N*Np*Nt);
  327. assert(N % COORD_DIM == 0);
  328. Vector<Real> B0(N*Nt*Np);
  329. { // Set B0
  330. Vector<Real> sin_phi(Np), cos_phi(Np);
  331. for (Long i = 0; i < Np; i++) {
  332. sin_phi[i] = sin(2 * const_pi<Real>() * i / Np);
  333. cos_phi[i] = cos(2 * const_pi<Real>() * i / Np);
  334. }
  335. const auto& Y = LegendreNodes(Nt - 1);
  336. assert(Y.Dim() == Nt);
  337. Long Ngrid = Nt * Np;
  338. for (Long k = 0; k < N; k+=COORD_DIM) {
  339. for (Long i = 0; i < Nt; i++) {
  340. Real sin_theta = sqrt<Real>(1 - Y[i]*Y[i]);
  341. Real cos_theta = Y[i];
  342. Real csc_theta = 1 / sin_theta;
  343. const auto X_ = X.begin() + (k*Nt+i)*Np;
  344. auto B0_ = B0.begin() + (k*Nt+i)*Np;
  345. for (Long j = 0; j < Np; j++) {
  346. StaticArray<Real,3> in;
  347. in[0] = X_[0*Ngrid+j];
  348. in[1] = X_[1*Ngrid+j];
  349. in[2] = X_[2*Ngrid+j];
  350. StaticArray<Real,9> Q;
  351. { // Set Q
  352. Q[0] = sin_theta*cos_phi[j]; Q[1] = sin_theta*sin_phi[j]; Q[2] = cos_theta;
  353. Q[3] = cos_theta*cos_phi[j]; Q[4] = cos_theta*sin_phi[j]; Q[5] =-sin_theta;
  354. Q[6] = -sin_phi[j]; Q[7] = cos_phi[j]; Q[8] = 0;
  355. }
  356. B0_[0*Ngrid+j] = ( Q[0] * in[0] + Q[1] * in[1] + Q[2] * in[2] );
  357. B0_[1*Ngrid+j] = ( Q[3] * in[0] + Q[4] * in[1] + Q[5] * in[2] ) * csc_theta;
  358. B0_[2*Ngrid+j] = ( Q[6] * in[0] + Q[7] * in[1] + Q[8] * in[2] ) * csc_theta;
  359. }
  360. }
  361. }
  362. }
  363. Long p_ = p0 + 1;
  364. Long M0 = (p0+1)*(p0+1);
  365. Long M_ = (p_+1)*(p_+1);
  366. Vector<Real> B1(N*M_);
  367. Grid2SHC_(B0, Nt, Np, p_, B1);
  368. Vector<Real> B2(N*M0);
  369. const Complex<Real> imag(0,1);
  370. for (Long i=0; i<N; i+=COORD_DIM) {
  371. for (Long m=0; m<=p0; m++) {
  372. for (Long n=m; n<=p0; n++) {
  373. auto read_coeff = [&](const Vector<Real>& coeff, Long i, Long p, Long n, Long m) {
  374. Complex<Real> c;
  375. if (0<=m && m<=n && n<=p) {
  376. Long idx_real = ((2*p-m+3)*m - (m?p+1:0))*N + (p+1-m)*i - m + n;
  377. Long idx_imag = idx_real + (p+1-m)*N;
  378. c.real = coeff[idx_real];
  379. if (m) c.imag = coeff[idx_imag];
  380. }
  381. return c;
  382. };
  383. auto write_coeff = [&](Complex<Real> c, Vector<Real>& coeff, Long i, Long p, Long n, Long m) {
  384. if (0<=m && m<=n && n<=p) {
  385. Long idx_real = ((2*p-m+3)*m - (m?p+1:0))*N + (p+1-m)*i - m + n;
  386. Long idx_imag = idx_real + (p+1-m)*N;
  387. coeff[idx_real] = c.real;
  388. if (m) coeff[idx_imag] = c.imag;
  389. }
  390. };
  391. auto gr = [&](Long n, Long m) { return read_coeff(B1, i+0, p_, n, m); };
  392. auto gt = [&](Long n, Long m) { return read_coeff(B1, i+1, p_, n, m); };
  393. auto gp = [&](Long n, Long m) { return read_coeff(B1, i+2, p_, n, m); };
  394. Complex<Real> phiY, phiG, phiX;
  395. { // (phiG, phiX) <-- (gt, gp)
  396. auto A = [&](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>(n*n * ((n+1)*(n+1) - m*m) / (Real)((2*n+1)*(2*n+3))) : 0); };
  397. auto B = [&](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>((n+1)*(n+1) * (n*n - m*m) / (Real)((2*n+1)*(2*n-1))) : 0); };
  398. phiY = gr(n,m);
  399. phiG = (gt(n+1,m)*A(n,m) - gt(n-1,m)*B(n,m) - imag*m*gp(n,m)) * (1/(Real)(std::max<Long>(n,1)*(n+1)));
  400. phiX = (gp(n+1,m)*A(n,m) - gp(n-1,m)*B(n,m) + imag*m*gt(n,m)) * (1/(Real)(std::max<Long>(n,1)*(n+1)));
  401. }
  402. auto phiV = (phiG * (n + 0) - phiY) * (1/(Real)(2*n + 1));
  403. auto phiW = (phiG * (n + 1) + phiY) * (1/(Real)(2*n + 1));
  404. if (n==0) {
  405. phiW = 0;
  406. phiX = 0;
  407. }
  408. write_coeff(phiV, B2, i+0, p0, n, m);
  409. write_coeff(phiW, B2, i+1, p0, n, m);
  410. write_coeff(phiX, B2, i+2, p0, n, m);
  411. }
  412. }
  413. }
  414. SHCArrange0(B2, p0, S, arrange);
  415. }
  416. template <class Real> void SphericalHarmonics<Real>::VecSHC2Grid(const Vector<Real>& S, SHCArrange arrange, Long p0, Long Nt, Long Np, Vector<Real>& X) {
  417. Vector<Real> B0;
  418. SHCArrange1(S, arrange, p0, B0);
  419. Long p_ = p0 + 1;
  420. Long M0 = (p0+1)*(p0+1);
  421. Long M_ = (p_+1)*(p_+1);
  422. Long N = B0.Dim() / M0;
  423. assert(B0.Dim() == N*M0);
  424. assert(N % COORD_DIM == 0);
  425. Vector<Real> B1(N*M_);
  426. const Complex<Real> imag(0,1);
  427. for (Long i=0; i<N; i+=COORD_DIM) {
  428. for (Long m=0; m<=p_; m++) {
  429. for (Long n=m; n<=p_; n++) {
  430. auto read_coeff = [&](const Vector<Real>& coeff, Long i, Long p, Long n, Long m) {
  431. Complex<Real> c;
  432. if (0<=m && m<=n && n<=p) {
  433. Long idx_real = ((2*p-m+3)*m - (m?p+1:0))*N + (p+1-m)*i - m + n;
  434. Long idx_imag = idx_real + (p+1-m)*N;
  435. c.real = coeff[idx_real];
  436. if (m) c.imag = coeff[idx_imag];
  437. }
  438. return c;
  439. };
  440. auto write_coeff = [&](Complex<Real> c, Vector<Real>& coeff, Long i, Long p, Long n, Long m) {
  441. if (0<=m && m<=n && n<=p) {
  442. Long idx_real = ((2*p-m+3)*m - (m?p+1:0))*N + (p+1-m)*i - m + n;
  443. Long idx_imag = idx_real + (p+1-m)*N;
  444. coeff[idx_real] = c.real;
  445. if (m) coeff[idx_imag] = c.imag;
  446. }
  447. };
  448. auto phiG = [&](Long n, Long m) {
  449. auto phiV = read_coeff(B0, i+0, p0, n, m);
  450. auto phiW = read_coeff(B0, i+1, p0, n, m);
  451. return phiV + phiW;
  452. };
  453. auto phiY = [&](Long n, Long m) {
  454. auto phiV = read_coeff(B0, i+0, p0, n, m);
  455. auto phiW = read_coeff(B0, i+1, p0, n, m);
  456. return phiW * n - phiV * (n + 1);
  457. };
  458. auto phiX = [&](Long n, Long m) {
  459. return read_coeff(B0, i+2, p0, n, m);
  460. };
  461. Complex<Real> gr, gt, gp;
  462. { // (gt, gp) <-- (phiG, phiX)
  463. auto A = [&](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>(n*n * ((n+1)*(n+1) - m*m) / (Real)((2*n+1)*(2*n+3))) : 0); };
  464. auto B = [&](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>((n+1)*(n+1) * (n*n - m*m) / (Real)((2*n+1)*(2*n-1))) : 0); };
  465. gr = phiY(n,m);
  466. gt = phiG(n-1,m)*A(n-1,m) - phiG(n+1,m)*B(n+1,m) - imag*m*phiX(n,m);
  467. gp = phiX(n-1,m)*A(n-1,m) - phiX(n+1,m)*B(n+1,m) + imag*m*phiG(n,m);
  468. }
  469. write_coeff(gr, B1, i+0, p_, n, m);
  470. write_coeff(gt, B1, i+1, p_, n, m);
  471. write_coeff(gp, B1, i+2, p_, n, m);
  472. }
  473. }
  474. }
  475. { // Set X
  476. SHC2Grid_(B1, p_, Nt, Np, &X);
  477. Vector<Real> sin_phi(Np), cos_phi(Np);
  478. for (Long i = 0; i < Np; i++) {
  479. sin_phi[i] = sin(2 * const_pi<Real>() * i / Np);
  480. cos_phi[i] = cos(2 * const_pi<Real>() * i / Np);
  481. }
  482. const auto& Y = LegendreNodes(Nt - 1);
  483. assert(Y.Dim() == Nt);
  484. Long Ngrid = Nt * Np;
  485. for (Long k = 0; k < N; k+=COORD_DIM) {
  486. for (Long i = 0; i < Nt; i++) {
  487. Real sin_theta = sqrt<Real>(1 - Y[i]*Y[i]);
  488. Real cos_theta = Y[i];
  489. Real csc_theta = 1 / sin_theta;
  490. auto X_ = X.begin() + (k*Nt+i)*Np;
  491. for (Long j = 0; j < Np; j++) {
  492. StaticArray<Real,3> in;
  493. in[0] = X_[0*Ngrid+j];
  494. in[1] = X_[1*Ngrid+j] * csc_theta;
  495. in[2] = X_[2*Ngrid+j] * csc_theta;
  496. StaticArray<Real,9> Q;
  497. { // Set Q
  498. Q[0] = sin_theta*cos_phi[j]; Q[1] = sin_theta*sin_phi[j]; Q[2] = cos_theta;
  499. Q[3] = cos_theta*cos_phi[j]; Q[4] = cos_theta*sin_phi[j]; Q[5] =-sin_theta;
  500. Q[6] = -sin_phi[j]; Q[7] = cos_phi[j]; Q[8] = 0;
  501. }
  502. X_[0*Ngrid+j] = ( Q[0] * in[0] + Q[3] * in[1] + Q[6] * in[2] );
  503. X_[1*Ngrid+j] = ( Q[1] * in[0] + Q[4] * in[1] + Q[7] * in[2] );
  504. X_[2*Ngrid+j] = ( Q[2] * in[0] + Q[5] * in[1] + Q[8] * in[2] );
  505. }
  506. }
  507. }
  508. }
  509. }
  510. template <class Real> void SphericalHarmonics<Real>::VecSHCEval(const Vector<Real>& S, SHCArrange arrange, Long p0, const Vector<Real>& cos_theta_phi, Vector<Real>& X) {
  511. Long M = (p0+1) * (p0+1);
  512. Long dof;
  513. Matrix<Real> B1;
  514. { // Set B1, dof
  515. Vector<Real> B0;
  516. SHCArrange1(S, arrange, p0, B0);
  517. dof = B0.Dim() / M / COORD_DIM;
  518. assert(B0.Dim() == dof * COORD_DIM * M);
  519. B1.ReInit(dof, COORD_DIM * M);
  520. Vector<Real> B1_(B1.Dim(0) * B1.Dim(1), B1.begin(), false);
  521. SHCArrange0(B0, p0, B1_, SHCArrange::COL_MAJOR_NONZERO);
  522. }
  523. assert(B1.Dim(1) == COORD_DIM * M);
  524. assert(B1.Dim(0) == dof);
  525. Matrix<Real> SHBasis;
  526. VecSHBasisEval(p0, cos_theta_phi, SHBasis);
  527. assert(SHBasis.Dim(1) == COORD_DIM * M);
  528. Long N = SHBasis.Dim(0) / COORD_DIM;
  529. { // Set X <-- Q * SHBasis * B1
  530. if (X.Dim() != N * dof * COORD_DIM) X.ReInit(N * dof * COORD_DIM);
  531. for (Long k0 = 0; k0 < N; k0++) {
  532. StaticArray<Real,9> Q;
  533. { // Set Q
  534. Real cos_theta = cos_theta_phi[k0 * 2 + 0];
  535. Real sin_theta = sqrt<Real>(1 - cos_theta * cos_theta);
  536. Real cos_phi = cos(cos_theta_phi[k0 * 2 + 1]);
  537. Real sin_phi = sin(cos_theta_phi[k0 * 2 + 1]);
  538. Q[0] = sin_theta*cos_phi; Q[1] = sin_theta*sin_phi; Q[2] = cos_theta;
  539. Q[3] = cos_theta*cos_phi; Q[4] = cos_theta*sin_phi; Q[5] =-sin_theta;
  540. Q[6] = -sin_phi; Q[7] = cos_phi; Q[8] = 0;
  541. }
  542. for (Long k1 = 0; k1 < dof; k1++) { // Set X <-- Q * SHBasis * B1
  543. StaticArray<Real,COORD_DIM> in;
  544. for (Long j = 0; j < COORD_DIM; j++) {
  545. in[j] = 0;
  546. for (Long i = 0; i < COORD_DIM * M; i++) {
  547. in[j] += B1[k1][i] * SHBasis[k0 * COORD_DIM + j][i];
  548. }
  549. }
  550. X[(k0 * dof + k1) * COORD_DIM + 0] = Q[0] * in[0] + Q[3] * in[1] + Q[6] * in[2];
  551. X[(k0 * dof + k1) * COORD_DIM + 1] = Q[1] * in[0] + Q[4] * in[1] + Q[7] * in[2];
  552. X[(k0 * dof + k1) * COORD_DIM + 2] = Q[2] * in[0] + Q[5] * in[1] + Q[8] * in[2];
  553. }
  554. }
  555. }
  556. }
  557. template <class Real> void SphericalHarmonics<Real>::StokesEvalSL(const Vector<Real>& S, SHCArrange arrange, Long p0, const Vector<Real>& coord, bool interior, Vector<Real>& X) {
  558. Long M = (p0+1) * (p0+1);
  559. Long dof;
  560. Matrix<Real> B1;
  561. { // Set B1, dof
  562. Vector<Real> B0;
  563. SHCArrange1(S, arrange, p0, B0);
  564. dof = B0.Dim() / M / COORD_DIM;
  565. assert(B0.Dim() == dof * COORD_DIM * M);
  566. B1.ReInit(dof, COORD_DIM * M);
  567. Vector<Real> B1_(B1.Dim(0) * B1.Dim(1), B1.begin(), false);
  568. SHCArrange0(B0, p0, B1_, SHCArrange::COL_MAJOR_NONZERO);
  569. }
  570. assert(B1.Dim(1) == COORD_DIM * M);
  571. assert(B1.Dim(0) == dof);
  572. Long N, p_;
  573. Matrix<Real> SHBasis;
  574. Vector<Real> R, cos_theta_phi;
  575. { // Set N, p_, R, SHBasis
  576. p_ = p0 + 1;
  577. Real M_ = (p_+1) * (p_+1);
  578. N = coord.Dim() / COORD_DIM;
  579. assert(coord.Dim() == N * COORD_DIM);
  580. R.ReInit(N);
  581. cos_theta_phi.ReInit(2 * N);
  582. for (Long i = 0; i < N; i++) { // Set R, cos_theta_phi
  583. ConstIterator<Real> x = coord.begin() + i * COORD_DIM;
  584. R[i] = sqrt<Real>(x[0]*x[0] + x[1]*x[1] + x[2]*x[2]);
  585. cos_theta_phi[i * 2 + 0] = x[2] / R[i];
  586. cos_theta_phi[i * 2 + 1] = atan2(x[1], x[0]); // TODO: works only for float and double
  587. }
  588. SHBasisEval(p_, cos_theta_phi, SHBasis);
  589. assert(SHBasis.Dim(1) == M_);
  590. assert(SHBasis.Dim(0) == N);
  591. SCTL_UNUSED(M_);
  592. }
  593. Matrix<Real> StokesOp(N * COORD_DIM, COORD_DIM * M);
  594. for (Long i = 0; i < N; i++) { // Set StokesOp
  595. Real cos_theta, csc_theta, cos_phi, sin_phi;
  596. { // Set exp_phi, cos_theta, csc_theta, cos_phi, sin_phi
  597. cos_theta = cos_theta_phi[i * 2 + 0];
  598. csc_theta = 1 / sqrt<Real>(1 - cos_theta * cos_theta);
  599. cos_phi = cos(cos_theta_phi[i * 2 + 1]);
  600. sin_phi = sin(cos_theta_phi[i * 2 + 1]);
  601. }
  602. Complex<Real> imag(0,1), exp_phi(cos_phi, sin_phi);
  603. for (Long m = 0; m <= p0; m++) {
  604. for (Long n = m; n <= p0; n++) {
  605. auto write_coeff = [&](Complex<Real> c, Long n, Long m, Long k0, Long k1) {
  606. if (0 <= m && m <= n && n <= p0 && 0 <= k0 && k0 < COORD_DIM && 0 <= k1 && k1 < COORD_DIM) {
  607. Long idx = (2 * p0 - m + 2) * m - (m ? p0+1 : 0) + n;
  608. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.real;
  609. if (m) {
  610. idx += (p0+1-m);
  611. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.imag;
  612. }
  613. }
  614. };
  615. Complex<Real> Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp;
  616. { // Set vector spherical harmonics
  617. auto Y = [&SHBasis,p_,i](Long n, Long m) {
  618. Complex<Real> c;
  619. if (0 <= m && m <= n && n <= p_) {
  620. Long idx = (2 * p_ - m + 2) * m - (m ? p_+1 : 0) + n;
  621. c.real = SHBasis[i][idx];
  622. if (m) {
  623. idx += (p_+1-m);
  624. c.imag = SHBasis[i][idx];
  625. }
  626. }
  627. return c;
  628. };
  629. Complex<Real> Y_0 = Y(n - 1, m);
  630. Complex<Real> Y_1 = Y(n + 0, m);
  631. Complex<Real> Y_2 = Y(n + 1, m);
  632. Complex<Real> Ycsc_0 = Y_0 * csc_theta;
  633. Complex<Real> Ycsc_1 = Y_1 * csc_theta;
  634. Complex<Real> Ycsc_2 = Y_2 * csc_theta;
  635. if (fabs(cos_theta) == 1) {
  636. auto Y_csc0 = [exp_phi, cos_theta](Long n, Long m) {
  637. if (m == 1) -sqrt<Real>((2*n+1)*n*(n+1)) * ((n%2==0) && (cos_theta<0) ? -1 : 1) * exp_phi;
  638. return Complex<Real>(0, 0);
  639. };
  640. Ycsc_0 = Y_csc0(n - 1, m);
  641. Ycsc_1 = Y_csc0(n + 0, m);
  642. Ycsc_2 = Y_csc0(n + 1, m);
  643. }
  644. auto Anm = (0<=n && m<=n && n<=p_ ? sqrt<Real>(n*n * ((n+1)*(n+1) - m*m) / (Real)((2*n+1)*(2*n+3))) : 0);
  645. auto Bnm = (0<=n && m<=n && n<=p_ ? sqrt<Real>((n+1)*(n+1) * (n*n - m*m) / (Real)((2*n+1)*(2*n-1))) : 0);
  646. auto SetVecSH = [&imag,n,m](Complex<Real>& Vr, Complex<Real>& Vt, Complex<Real>& Vp, Complex<Real>& Wr, Complex<Real>& Wt, Complex<Real>& Wp, Complex<Real>& Xr, Complex<Real>& Xt, Complex<Real>& Xp, const Complex<Real> C0, const Complex<Real> C1, const Complex<Real> C2) {
  647. Vr = C0 * (-n-1);
  648. Vt = C2;
  649. Vp = -imag * m * C1;
  650. Wr = C0 * n;
  651. Wt = C2;
  652. Wp = -imag * m * C1;
  653. Xr = 0;
  654. Xt = imag * m * C1;
  655. Xp = C2;
  656. };
  657. { // Set Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp
  658. auto C0 = Y_1;
  659. auto C1 = Ycsc_1;
  660. auto C2 = (Anm * Ycsc_2 - Bnm * Ycsc_0);
  661. SetVecSH(Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp, C0, C1, C2);
  662. }
  663. }
  664. Complex<Real> SVr, SVt, SVp;
  665. Complex<Real> SWr, SWt, SWp;
  666. Complex<Real> SXr, SXt, SXp;
  667. if (interior) {
  668. Real a,b;
  669. a = n / (Real)((2*n+1) * (2*n+3)) * pow<Real>(R[i], n+1);
  670. b = -(n+1) / (Real)(4*n+2) * (pow<Real>(R[i], n-1) - pow<Real>(R[i], n+1));
  671. SVr = a * Vr + b * Wr;
  672. SVt = a * Vt + b * Wt;
  673. SVp = a * Vp + b * Wp;
  674. a = (n+1) / (Real)((2*n+1) * (2*n-1)) * pow<Real>(R[i], n-1);
  675. SWr = a * Wr;
  676. SWt = a * Wt;
  677. SWp = a * Wp;
  678. a = 1 / (Real)(2*n+1) * pow<Real>(R[i], n);
  679. SXr = a * Xr;
  680. SXt = a * Xt;
  681. SXp = a * Xp;
  682. } else {
  683. Real a,b;
  684. a = n / (Real)((2*n+1) * (2*n+3)) * pow<Real>(R[i], -n-2);
  685. SVr = a * Vr;
  686. SVt = a * Vt;
  687. SVp = a * Vp;
  688. a = (n+1) / (Real)((2*n+1) * (2*n-1)) * pow<Real>(R[i], -n);
  689. b = n / (Real)(4*n+2) * (pow<Real>(R[i], -n-2) - pow<Real>(R[i], -n));
  690. SWr = a * Wr + b * Vr;
  691. SWt = a * Wt + b * Vt;
  692. SWp = a * Wp + b * Vp;
  693. a = 1 / (Real)(2*n+1) * pow<Real>(R[i], -n-1);
  694. SXr = a * Xr;
  695. SXt = a * Xt;
  696. SXp = a * Xp;
  697. }
  698. write_coeff(SVr, n, m, 0, 0);
  699. write_coeff(SVt, n, m, 0, 1);
  700. write_coeff(SVp, n, m, 0, 2);
  701. write_coeff(SWr, n, m, 1, 0);
  702. write_coeff(SWt, n, m, 1, 1);
  703. write_coeff(SWp, n, m, 1, 2);
  704. write_coeff(SXr, n, m, 2, 0);
  705. write_coeff(SXt, n, m, 2, 1);
  706. write_coeff(SXp, n, m, 2, 2);
  707. }
  708. }
  709. }
  710. { // Set X <-- Q * StokesOp * B1
  711. if (X.Dim() != N * dof * COORD_DIM) X.ReInit(N * dof * COORD_DIM);
  712. for (Long k0 = 0; k0 < N; k0++) {
  713. StaticArray<Real,9> Q;
  714. { // Set Q
  715. Real cos_theta = cos_theta_phi[k0 * 2 + 0];
  716. Real sin_theta = sqrt<Real>(1 - cos_theta * cos_theta);
  717. Real cos_phi = cos(cos_theta_phi[k0 * 2 + 1]);
  718. Real sin_phi = sin(cos_theta_phi[k0 * 2 + 1]);
  719. Q[0] = sin_theta*cos_phi; Q[1] = sin_theta*sin_phi; Q[2] = cos_theta;
  720. Q[3] = cos_theta*cos_phi; Q[4] = cos_theta*sin_phi; Q[5] =-sin_theta;
  721. Q[6] = -sin_phi; Q[7] = cos_phi; Q[8] = 0;
  722. }
  723. for (Long k1 = 0; k1 < dof; k1++) { // Set X <-- Q * StokesOp * B1
  724. StaticArray<Real,COORD_DIM> in;
  725. for (Long j = 0; j < COORD_DIM; j++) {
  726. in[j] = 0;
  727. for (Long i = 0; i < COORD_DIM * M; i++) {
  728. in[j] += B1[k1][i] * StokesOp[k0 * COORD_DIM + j][i];
  729. }
  730. }
  731. X[(k0 * dof + k1) * COORD_DIM + 0] = Q[0] * in[0] + Q[3] * in[1] + Q[6] * in[2];
  732. X[(k0 * dof + k1) * COORD_DIM + 1] = Q[1] * in[0] + Q[4] * in[1] + Q[7] * in[2];
  733. X[(k0 * dof + k1) * COORD_DIM + 2] = Q[2] * in[0] + Q[5] * in[1] + Q[8] * in[2];
  734. }
  735. }
  736. }
  737. }
  738. template <class Real> void SphericalHarmonics<Real>::StokesEvalDL(const Vector<Real>& S, SHCArrange arrange, Long p0, const Vector<Real>& coord, bool interior, Vector<Real>& X) {
  739. Long M = (p0+1) * (p0+1);
  740. Long dof;
  741. Matrix<Real> B1;
  742. { // Set B1, dof
  743. Vector<Real> B0;
  744. SHCArrange1(S, arrange, p0, B0);
  745. dof = B0.Dim() / M / COORD_DIM;
  746. assert(B0.Dim() == dof * COORD_DIM * M);
  747. B1.ReInit(dof, COORD_DIM * M);
  748. Vector<Real> B1_(B1.Dim(0) * B1.Dim(1), B1.begin(), false);
  749. SHCArrange0(B0, p0, B1_, SHCArrange::COL_MAJOR_NONZERO);
  750. }
  751. assert(B1.Dim(1) == COORD_DIM * M);
  752. assert(B1.Dim(0) == dof);
  753. Long N, p_;
  754. Matrix<Real> SHBasis;
  755. Vector<Real> R, cos_theta_phi;
  756. { // Set N, p_, R, SHBasis
  757. p_ = p0 + 1;
  758. Real M_ = (p_+1) * (p_+1);
  759. N = coord.Dim() / COORD_DIM;
  760. assert(coord.Dim() == N * COORD_DIM);
  761. R.ReInit(N);
  762. cos_theta_phi.ReInit(2 * N);
  763. for (Long i = 0; i < N; i++) { // Set R, cos_theta_phi
  764. ConstIterator<Real> x = coord.begin() + i * COORD_DIM;
  765. R[i] = sqrt<Real>(x[0]*x[0] + x[1]*x[1] + x[2]*x[2]);
  766. cos_theta_phi[i * 2 + 0] = x[2] / R[i];
  767. cos_theta_phi[i * 2 + 1] = atan2(x[1], x[0]); // TODO: works only for float and double
  768. }
  769. SHBasisEval(p_, cos_theta_phi, SHBasis);
  770. assert(SHBasis.Dim(1) == M_);
  771. assert(SHBasis.Dim(0) == N);
  772. SCTL_UNUSED(M_);
  773. }
  774. Matrix<Real> StokesOp(N * COORD_DIM, COORD_DIM * M);
  775. for (Long i = 0; i < N; i++) { // Set StokesOp
  776. Real cos_theta, csc_theta, cos_phi, sin_phi;
  777. { // Set exp_phi, cos_theta, csc_theta, cos_phi, sin_phi
  778. cos_theta = cos_theta_phi[i * 2 + 0];
  779. csc_theta = 1 / sqrt<Real>(1 - cos_theta * cos_theta);
  780. cos_phi = cos(cos_theta_phi[i * 2 + 1]);
  781. sin_phi = sin(cos_theta_phi[i * 2 + 1]);
  782. }
  783. Complex<Real> imag(0,1), exp_phi(cos_phi, sin_phi);
  784. for (Long m = 0; m <= p0; m++) {
  785. for (Long n = m; n <= p0; n++) {
  786. auto write_coeff = [&](Complex<Real> c, Long n, Long m, Long k0, Long k1) {
  787. if (0 <= m && m <= n && n <= p0 && 0 <= k0 && k0 < COORD_DIM && 0 <= k1 && k1 < COORD_DIM) {
  788. Long idx = (2 * p0 - m + 2) * m - (m ? p0+1 : 0) + n;
  789. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.real;
  790. if (m) {
  791. idx += (p0+1-m);
  792. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.imag;
  793. }
  794. }
  795. };
  796. Complex<Real> Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp;
  797. { // Set vector spherical harmonics
  798. auto Y = [&SHBasis,p_,i](Long n, Long m) {
  799. Complex<Real> c;
  800. if (0 <= m && m <= n && n <= p_) {
  801. Long idx = (2 * p_ - m + 2) * m - (m ? p_+1 : 0) + n;
  802. c.real = SHBasis[i][idx];
  803. if (m) {
  804. idx += (p_+1-m);
  805. c.imag = SHBasis[i][idx];
  806. }
  807. }
  808. return c;
  809. };
  810. Complex<Real> Y_0 = Y(n - 1, m);
  811. Complex<Real> Y_1 = Y(n + 0, m);
  812. Complex<Real> Y_2 = Y(n + 1, m);
  813. Complex<Real> Ycsc_0 = Y_0 * csc_theta;
  814. Complex<Real> Ycsc_1 = Y_1 * csc_theta;
  815. Complex<Real> Ycsc_2 = Y_2 * csc_theta;
  816. if (fabs(cos_theta) == 1) {
  817. auto Y_csc0 = [exp_phi, cos_theta](Long n, Long m) {
  818. if (m == 1) -sqrt<Real>((2*n+1)*n*(n+1)) * ((n%2==0) && (cos_theta<0) ? -1 : 1) * exp_phi;
  819. return Complex<Real>(0, 0);
  820. };
  821. Ycsc_0 = Y_csc0(n - 1, m);
  822. Ycsc_1 = Y_csc0(n + 0, m);
  823. Ycsc_2 = Y_csc0(n + 1, m);
  824. }
  825. auto Anm = (0<=n && m<=n && n<=p_ ? sqrt<Real>(n*n * ((n+1)*(n+1) - m*m) / (Real)((2*n+1)*(2*n+3))) : 0);
  826. auto Bnm = (0<=n && m<=n && n<=p_ ? sqrt<Real>((n+1)*(n+1) * (n*n - m*m) / (Real)((2*n+1)*(2*n-1))) : 0);
  827. auto SetVecSH = [&imag,n,m](Complex<Real>& Vr, Complex<Real>& Vt, Complex<Real>& Vp, Complex<Real>& Wr, Complex<Real>& Wt, Complex<Real>& Wp, Complex<Real>& Xr, Complex<Real>& Xt, Complex<Real>& Xp, const Complex<Real> C0, const Complex<Real> C1, const Complex<Real> C2) {
  828. Vr = C0 * (-n-1);
  829. Vt = C2;
  830. Vp = -imag * m * C1;
  831. Wr = C0 * n;
  832. Wt = C2;
  833. Wp = -imag * m * C1;
  834. Xr = 0;
  835. Xt = imag * m * C1;
  836. Xp = C2;
  837. };
  838. { // Set Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp
  839. auto C0 = Y_1;
  840. auto C1 = Ycsc_1;
  841. auto C2 = (Anm * Ycsc_2 - Bnm * Ycsc_0);
  842. SetVecSH(Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp, C0, C1, C2);
  843. }
  844. }
  845. Complex<Real> SVr, SVt, SVp;
  846. Complex<Real> SWr, SWt, SWp;
  847. Complex<Real> SXr, SXt, SXp;
  848. if (interior) {
  849. Real a,b;
  850. a = -2*n*(n+2) / (Real)((2*n+1) * (2*n+3)) * pow<Real>(R[i], n+1);
  851. b = -(n+1)*(n+2) / (Real)(2*n+1) * (pow<Real>(R[i], n+1) - pow<Real>(R[i], n-1));
  852. SVr = a * Vr + b * Wr;
  853. SVt = a * Vt + b * Wt;
  854. SVp = a * Vp + b * Wp;
  855. a = -(2*n*n+1) / (Real)((2*n+1) * (2*n-1)) * pow<Real>(R[i], n-1);
  856. SWr = a * Wr;
  857. SWt = a * Wt;
  858. SWp = a * Wp;
  859. a = -(n+2) / (Real)(2*n+1) * pow<Real>(R[i], n);
  860. SXr = a * Xr;
  861. SXt = a * Xt;
  862. SXp = a * Xp;
  863. } else {
  864. Real a,b;
  865. a = (2*n*n+4*n+3) / (Real)((2*n+1) * (2*n+3)) * pow<Real>(R[i], -n-2);
  866. SVr = a * Vr;
  867. SVt = a * Vt;
  868. SVp = a * Vp;
  869. a = 2*(n+1)*(n-1) / (Real)((2*n+1) * (2*n-1)) * pow<Real>(R[i], -n);
  870. b = 2*n*(n-1) / (Real)(4*n+2) * (pow<Real>(R[i], -n-2) - pow<Real>(R[i], -n));
  871. SWr = a * Wr + b * Vr;
  872. SWt = a * Wt + b * Vt;
  873. SWp = a * Wp + b * Vp;
  874. a = (n-1) / (Real)(2*n+1) * pow<Real>(R[i], -n-1);
  875. SXr = a * Xr;
  876. SXt = a * Xt;
  877. SXp = a * Xp;
  878. }
  879. write_coeff(SVr, n, m, 0, 0);
  880. write_coeff(SVt, n, m, 0, 1);
  881. write_coeff(SVp, n, m, 0, 2);
  882. write_coeff(SWr, n, m, 1, 0);
  883. write_coeff(SWt, n, m, 1, 1);
  884. write_coeff(SWp, n, m, 1, 2);
  885. write_coeff(SXr, n, m, 2, 0);
  886. write_coeff(SXt, n, m, 2, 1);
  887. write_coeff(SXp, n, m, 2, 2);
  888. }
  889. }
  890. }
  891. { // Set X <-- Q * StokesOp * B1
  892. if (X.Dim() != N * dof * COORD_DIM) X.ReInit(N * dof * COORD_DIM);
  893. for (Long k0 = 0; k0 < N; k0++) {
  894. StaticArray<Real,9> Q;
  895. { // Set Q
  896. Real cos_theta = cos_theta_phi[k0 * 2 + 0];
  897. Real sin_theta = sqrt<Real>(1 - cos_theta * cos_theta);
  898. Real cos_phi = cos(cos_theta_phi[k0 * 2 + 1]);
  899. Real sin_phi = sin(cos_theta_phi[k0 * 2 + 1]);
  900. Q[0] = sin_theta*cos_phi; Q[1] = sin_theta*sin_phi; Q[2] = cos_theta;
  901. Q[3] = cos_theta*cos_phi; Q[4] = cos_theta*sin_phi; Q[5] =-sin_theta;
  902. Q[6] = -sin_phi; Q[7] = cos_phi; Q[8] = 0;
  903. }
  904. for (Long k1 = 0; k1 < dof; k1++) { // Set X <-- Q * StokesOp * B1
  905. StaticArray<Real,COORD_DIM> in;
  906. for (Long j = 0; j < COORD_DIM; j++) {
  907. in[j] = 0;
  908. for (Long i = 0; i < COORD_DIM * M; i++) {
  909. in[j] += B1[k1][i] * StokesOp[k0 * COORD_DIM + j][i];
  910. }
  911. }
  912. X[(k0 * dof + k1) * COORD_DIM + 0] = Q[0] * in[0] + Q[3] * in[1] + Q[6] * in[2];
  913. X[(k0 * dof + k1) * COORD_DIM + 1] = Q[1] * in[0] + Q[4] * in[1] + Q[7] * in[2];
  914. X[(k0 * dof + k1) * COORD_DIM + 2] = Q[2] * in[0] + Q[5] * in[1] + Q[8] * in[2];
  915. }
  916. }
  917. }
  918. }
  919. template <class Real> void SphericalHarmonics<Real>::StokesEvalKL(const Vector<Real>& S, SHCArrange arrange, Long p0, const Vector<Real>& coord, const Vector<Real>& norm, bool interior, Vector<Real>& X) {
  920. Long M = (p0+1) * (p0+1);
  921. Long dof;
  922. Matrix<Real> B1;
  923. { // Set B1, dof
  924. Vector<Real> B0;
  925. SHCArrange1(S, arrange, p0, B0);
  926. dof = B0.Dim() / M / COORD_DIM;
  927. assert(B0.Dim() == dof * COORD_DIM * M);
  928. B1.ReInit(dof, COORD_DIM * M);
  929. Vector<Real> B1_(B1.Dim(0) * B1.Dim(1), B1.begin(), false);
  930. SHCArrange0(B0, p0, B1_, SHCArrange::COL_MAJOR_NONZERO);
  931. }
  932. assert(B1.Dim(1) == COORD_DIM * M);
  933. assert(B1.Dim(0) == dof);
  934. Long N, p_;
  935. Matrix<Real> SHBasis;
  936. Vector<Real> R, cos_theta_phi;
  937. { // Set N, p_, R, SHBasis
  938. p_ = p0 + 1;
  939. Real M_ = (p_+1) * (p_+1);
  940. N = coord.Dim() / COORD_DIM;
  941. assert(coord.Dim() == N * COORD_DIM);
  942. R.ReInit(N);
  943. cos_theta_phi.ReInit(2 * N);
  944. for (Long i = 0; i < N; i++) { // Set R, cos_theta_phi
  945. ConstIterator<Real> x = coord.begin() + i * COORD_DIM;
  946. R[i] = sqrt<Real>(x[0]*x[0] + x[1]*x[1] + x[2]*x[2]);
  947. cos_theta_phi[i * 2 + 0] = x[2] / R[i];
  948. cos_theta_phi[i * 2 + 1] = atan2(x[1], x[0]); // TODO: works only for float and double
  949. }
  950. SHBasisEval(p_, cos_theta_phi, SHBasis);
  951. assert(SHBasis.Dim(1) == M_);
  952. assert(SHBasis.Dim(0) == N);
  953. SCTL_UNUSED(M_);
  954. }
  955. Matrix<Real> StokesOp(N * COORD_DIM, COORD_DIM * M);
  956. for (Long i = 0; i < N; i++) { // Set StokesOp
  957. Real cos_theta, sin_theta, csc_theta, cot_theta, cos_phi, sin_phi;
  958. { // Set cos_theta, sin_theta, cos_phi, sin_phi
  959. cos_theta = cos_theta_phi[i * 2 + 0];
  960. sin_theta = sqrt<Real>(1 - cos_theta * cos_theta);
  961. csc_theta = 1 / sin_theta;
  962. cot_theta = cos_theta * csc_theta;
  963. cos_phi = cos(cos_theta_phi[i * 2 + 1]);
  964. sin_phi = sin(cos_theta_phi[i * 2 + 1]);
  965. }
  966. Complex<Real> imag(0,1), exp_phi(cos_phi, sin_phi);
  967. StaticArray<Real, COORD_DIM> norm0;
  968. { // Set norm0 <-- Q^t * norm
  969. StaticArray<Real,9> Q;
  970. { // Set Q
  971. Q[0] = sin_theta*cos_phi; Q[1] = sin_theta*sin_phi; Q[2] = cos_theta;
  972. Q[3] = cos_theta*cos_phi; Q[4] = cos_theta*sin_phi; Q[5] =-sin_theta;
  973. Q[6] = -sin_phi; Q[7] = cos_phi; Q[8] = 0;
  974. }
  975. StaticArray<Real,COORD_DIM> in;
  976. in[0] = norm[i * COORD_DIM + 0];
  977. in[1] = norm[i * COORD_DIM + 1];
  978. in[2] = norm[i * COORD_DIM + 2];
  979. norm0[0] = Q[0] * in[0] + Q[1] * in[1] + Q[2] * in[2];
  980. norm0[1] = Q[3] * in[0] + Q[4] * in[1] + Q[5] * in[2];
  981. norm0[2] = Q[6] * in[0] + Q[7] * in[1] + Q[8] * in[2];
  982. }
  983. for (Long m = 0; m <= p0; m++) {
  984. for (Long n = m; n <= p0; n++) {
  985. auto write_coeff = [&](Complex<Real> c, Long n, Long m, Long k0, Long k1) {
  986. if (0 <= m && m <= n && n <= p0 && 0 <= k0 && k0 < COORD_DIM && 0 <= k1 && k1 < COORD_DIM) {
  987. Long idx = (2 * p0 - m + 2) * m - (m ? p0+1 : 0) + n;
  988. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.real;
  989. if (m) {
  990. idx += (p0+1-m);
  991. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.imag;
  992. }
  993. }
  994. };
  995. Complex<Real> Ynm;
  996. Complex<Real> Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp;
  997. Complex<Real> Vr_t, Vt_t, Vp_t, Wr_t, Wt_t, Wp_t, Xr_t, Xt_t, Xp_t;
  998. Complex<Real> Vr_p, Vt_p, Vp_p, Wr_p, Wt_p, Wp_p, Xr_p, Xt_p, Xp_p;
  999. { // Set vector spherical harmonics
  1000. auto Y = [&SHBasis,p_,i](Long n, Long m) {
  1001. Complex<Real> c;
  1002. if (0 <= m && m <= n && n <= p_) {
  1003. Long idx = (2 * p_ - m + 2) * m - (m ? p_+1 : 0) + n;
  1004. c.real = SHBasis[i][idx];
  1005. if (m) {
  1006. idx += (p_+1-m);
  1007. c.imag = SHBasis[i][idx];
  1008. }
  1009. }
  1010. return c;
  1011. };
  1012. auto Yt = [&Y, &R, i, cot_theta, csc_theta, sin_theta](Long n, Long m) {
  1013. return (n * cot_theta * Y(n, m) - (n + m) * sqrt<Real>((2*n+1)*std::max<Real>(0,n-m)/std::max<Real>(1,(2*n-1)*(n+m))) * Y(n - 1, m) * csc_theta) / R[i];
  1014. };
  1015. auto Yp = [&Y, &imag, &R, i, csc_theta](Long n, Long m) {
  1016. return imag * m * Y(n, m) * csc_theta / R[i];
  1017. };
  1018. Complex<Real> Y_0 = Y(n - 1, m);
  1019. Complex<Real> Y_1 = Y(n + 0, m);
  1020. Complex<Real> Y_2 = Y(n + 1, m);
  1021. Complex<Real> Y_0t = Yt(n - 1, m);
  1022. Complex<Real> Y_1t = Yt(n + 0, m);
  1023. Complex<Real> Y_2t = Yt(n + 1, m);
  1024. Complex<Real> Y_0p = Yp(n - 1, m);
  1025. Complex<Real> Y_1p = Yp(n + 0, m);
  1026. Complex<Real> Y_2p = Yp(n + 1, m);
  1027. auto Anm = (0<=n && m<=n && n<=p_ ? sqrt<Real>(n*n * ((n+1)*(n+1) - m*m) / (Real)((2*n+1)*(2*n+3))) : 0);
  1028. auto Bnm = (0<=n && m<=n && n<=p_ ? sqrt<Real>((n+1)*(n+1) * (n*n - m*m) / (Real)((2*n+1)*(2*n-1))) : 0);
  1029. auto SetVecSH = [&imag,n,m](Complex<Real>& Vr, Complex<Real>& Vt, Complex<Real>& Vp, Complex<Real>& Wr, Complex<Real>& Wt, Complex<Real>& Wp, Complex<Real>& Xr, Complex<Real>& Xt, Complex<Real>& Xp, const Complex<Real> C0, const Complex<Real> C1, const Complex<Real> C2) {
  1030. Vr = C0 * (-n-1);
  1031. Vt = C2;
  1032. Vp = -imag * m * C1;
  1033. Wr = C0 * n;
  1034. Wt = C2;
  1035. Wp = -imag * m * C1;
  1036. Xr = 0;
  1037. Xt = imag * m * C1;
  1038. Xp = C2;
  1039. };
  1040. { // Set Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp
  1041. auto C0 = Y_1;
  1042. auto C1 = Y_1 * csc_theta;
  1043. auto C2 = (Anm * Y_2 - Bnm * Y_0) * csc_theta;
  1044. SetVecSH(Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp, C0, C1, C2);
  1045. }
  1046. { // Set Vr_t, Vt_t, Vp_t, Wr_t, Wt_t, Wp_t, Xr_t, Xt_t, Xp_t
  1047. auto C0 = Y_1t;
  1048. auto C1 = (Y_1t - Y_1 * cot_theta / R[i]) * csc_theta;
  1049. auto C2 = ((Anm * Y_2t - Bnm * Y_0t) - (Anm * Y_2 - Bnm * Y_0) * cot_theta / R[i]) * csc_theta;
  1050. SetVecSH(Vr_t, Vt_t, Vp_t, Wr_t, Wt_t, Wp_t, Xr_t, Xt_t, Xp_t, C0, C1, C2);
  1051. Vr_t += (-Vt) / R[i];
  1052. Vt_t += ( Vr) / R[i];
  1053. Wr_t += (-Wt) / R[i];
  1054. Wt_t += ( Wr) / R[i];
  1055. Xr_t += (-Xt) / R[i];
  1056. Xt_t += ( Xr) / R[i];
  1057. }
  1058. { // Set Vr_p, Vt_p, Vp_p, Wr_p, Wt_p, Wp_p, Xr_p, Xt_p, Xp_p
  1059. auto C0 = -Y_1p;
  1060. auto C1 = -Y_1p * csc_theta;
  1061. auto C2 = -(Anm * Y_2p - Bnm * Y_0p) * csc_theta;
  1062. SetVecSH(Vr_p, Vt_p, Vp_p, Wr_p, Wt_p, Wp_p, Xr_p, Xt_p, Xp_p, C0, C1, C2);
  1063. Vr_p += (-sin_theta * Vp ) * csc_theta / R[i];
  1064. Vt_p += (-cos_theta * Vp ) * csc_theta / R[i];
  1065. Vp_p += ( sin_theta * Vr + cos_theta * Vt) * csc_theta / R[i];
  1066. Wr_p += (-sin_theta * Wp ) * csc_theta / R[i];
  1067. Wt_p += (-cos_theta * Wp ) * csc_theta / R[i];
  1068. Wp_p += ( sin_theta * Wr + cos_theta * Wt) * csc_theta / R[i];
  1069. Xr_p += (-sin_theta * Xp ) * csc_theta / R[i];
  1070. Xt_p += (-cos_theta * Xp ) * csc_theta / R[i];
  1071. Xp_p += ( sin_theta * Xr + cos_theta * Xt) * csc_theta / R[i];
  1072. }
  1073. Ynm = Y_1;
  1074. }
  1075. Complex<Real> PV, PW, PX;
  1076. Complex<Real> SV[COORD_DIM][COORD_DIM];
  1077. Complex<Real> SW[COORD_DIM][COORD_DIM];
  1078. Complex<Real> SX[COORD_DIM][COORD_DIM];
  1079. if (interior) {
  1080. PV = (n+1) * pow<Real>(R[i],n) * Ynm;
  1081. PW = 0;
  1082. PX = 0;
  1083. Real a, b;
  1084. Real a_r, b_r;
  1085. a = n / (Real)((2*n+1) * (2*n+3)) * pow<Real>(R[i], n+1);
  1086. b = -(n+1) / (Real)(4*n+2) * (pow<Real>(R[i], n-1) - pow<Real>(R[i], n+1));
  1087. a_r = n / (Real)((2*n+1) * (2*n+3)) * (n+1) * pow<Real>(R[i], n);
  1088. b_r = -(n+1) / (Real)(4*n+2) * ((n-1) * pow<Real>(R[i], n-2) - (n+1) * pow<Real>(R[i], n));
  1089. SV[0][0] = a_r * Vr + b_r * Wr;
  1090. SV[1][0] = a_r * Vt + b_r * Wt;
  1091. SV[2][0] = a_r * Vp + b_r * Wp;
  1092. SV[0][1] = a * Vr_t + b * Wr_t;
  1093. SV[1][1] = a * Vt_t + b * Wt_t;
  1094. SV[2][1] = a * Vp_t + b * Wp_t;
  1095. SV[0][2] = a * Vr_p + b * Wr_p;
  1096. SV[1][2] = a * Vt_p + b * Wt_p;
  1097. SV[2][2] = a * Vp_p + b * Wp_p;
  1098. a = (n+1) / (Real)((2*n+1) * (2*n-1)) * pow<Real>(R[i], n-1);
  1099. a_r = (n+1) / (Real)((2*n+1) * (2*n-1)) * (n-1) * pow<Real>(R[i], n-2);
  1100. SW[0][0] = a_r * Wr;
  1101. SW[1][0] = a_r * Wt;
  1102. SW[2][0] = a_r * Wp;
  1103. SW[0][1] = a * Wr_t;
  1104. SW[1][1] = a * Wt_t;
  1105. SW[2][1] = a * Wp_t;
  1106. SW[0][2] = a * Wr_p;
  1107. SW[1][2] = a * Wt_p;
  1108. SW[2][2] = a * Wp_p;
  1109. a = 1 / (Real)(2*n+1) * pow<Real>(R[i], n);
  1110. a_r = 1 / (Real)(2*n+1) * (n) * pow<Real>(R[i], n-1);
  1111. SX[0][0] = a_r * Xr;
  1112. SX[1][0] = a_r * Xt;
  1113. SX[2][0] = a_r * Xp;
  1114. SX[0][1] = a * Xr_t;
  1115. SX[1][1] = a * Xt_t;
  1116. SX[2][1] = a * Xp_t;
  1117. SX[0][2] = a * Xr_p;
  1118. SX[1][2] = a * Xt_p;
  1119. SX[2][2] = a * Xp_p;
  1120. } else {
  1121. PV = 0;
  1122. PW = n * pow<Real>(R[i],-n-1) * Ynm;
  1123. PX = 0;
  1124. Real a,b;
  1125. Real a_r, b_r;
  1126. a = n / (Real)((2*n+1) * (2*n+3)) * pow<Real>(R[i], -n-2);
  1127. a_r = n / (Real)((2*n+1) * (2*n+3)) * (-n-2) * pow<Real>(R[i], -n-3);
  1128. SV[0][0] = a_r * Vr;
  1129. SV[1][0] = a_r * Vt;
  1130. SV[2][0] = a_r * Vp;
  1131. SV[0][1] = a * Vr_t;
  1132. SV[1][1] = a * Vt_t;
  1133. SV[2][1] = a * Vp_t;
  1134. SV[0][2] = a * Vr_p;
  1135. SV[1][2] = a * Vt_p;
  1136. SV[2][2] = a * Vp_p;
  1137. a = (n+1) / (Real)((2*n+1) * (2*n-1)) * pow<Real>(R[i], -n);
  1138. b = n / (Real)(4*n+2) * (pow<Real>(R[i], -n-2) - pow<Real>(R[i], -n));
  1139. a_r = (n+1) / (Real)((2*n+1) * (2*n-1)) * (-n) * pow<Real>(R[i], -n-1);
  1140. b_r = n / (Real)(4*n+2) * ((-n-2)*pow<Real>(R[i], -n-3) - (-n)*pow<Real>(R[i], -n-1));
  1141. SW[0][0] = a_r * Wr + b_r * Vr;
  1142. SW[1][0] = a_r * Wt + b_r * Vt;
  1143. SW[2][0] = a_r * Wp + b_r * Vp;
  1144. SW[0][1] = a * Wr_t + b * Vr_t;
  1145. SW[1][1] = a * Wt_t + b * Vt_t;
  1146. SW[2][1] = a * Wp_t + b * Vp_t;
  1147. SW[0][2] = a * Wr_p + b * Vr_p;
  1148. SW[1][2] = a * Wt_p + b * Vt_p;
  1149. SW[2][2] = a * Wp_p + b * Vp_p;
  1150. a = 1 / (Real)(2*n+1) * pow<Real>(R[i], -n-1);
  1151. a_r = 1 / (Real)(2*n+1) * (-n-1) * pow<Real>(R[i], -n-2);
  1152. SX[0][0] = a_r * Xr;
  1153. SX[1][0] = a_r * Xt;
  1154. SX[2][0] = a_r * Xp;
  1155. SX[0][1] = a * Xr_t;
  1156. SX[1][1] = a * Xt_t;
  1157. SX[2][1] = a * Xp_t;
  1158. SX[0][2] = a * Xr_p;
  1159. SX[1][2] = a * Xt_p;
  1160. SX[2][2] = a * Xp_p;
  1161. }
  1162. Complex<Real> KV[COORD_DIM][COORD_DIM], KW[COORD_DIM][COORD_DIM], KX[COORD_DIM][COORD_DIM];
  1163. KV[0][0] = SV[0][0] + SV[0][0] - PV; KV[0][1] = SV[0][1] + SV[1][0] ; KV[0][2] = SV[0][2] + SV[2][0] ;
  1164. KV[1][0] = SV[1][0] + SV[0][1] ; KV[1][1] = SV[1][1] + SV[1][1] - PV; KV[1][2] = SV[1][2] + SV[2][1] ;
  1165. KV[2][0] = SV[2][0] + SV[0][2] ; KV[2][1] = SV[2][1] + SV[1][2] ; KV[2][2] = SV[2][2] + SV[2][2] - PV;
  1166. KW[0][0] = SW[0][0] + SW[0][0] - PW; KW[0][1] = SW[0][1] + SW[1][0] ; KW[0][2] = SW[0][2] + SW[2][0] ;
  1167. KW[1][0] = SW[1][0] + SW[0][1] ; KW[1][1] = SW[1][1] + SW[1][1] - PW; KW[1][2] = SW[1][2] + SW[2][1] ;
  1168. KW[2][0] = SW[2][0] + SW[0][2] ; KW[2][1] = SW[2][1] + SW[1][2] ; KW[2][2] = SW[2][2] + SW[2][2] - PW;
  1169. KX[0][0] = SX[0][0] + SX[0][0] - PX; KX[0][1] = SX[0][1] + SX[1][0] ; KX[0][2] = SX[0][2] + SX[2][0] ;
  1170. KX[1][0] = SX[1][0] + SX[0][1] ; KX[1][1] = SX[1][1] + SX[1][1] - PX; KX[1][2] = SX[1][2] + SX[2][1] ;
  1171. KX[2][0] = SX[2][0] + SX[0][2] ; KX[2][1] = SX[2][1] + SX[1][2] ; KX[2][2] = SX[2][2] + SX[2][2] - PX;
  1172. write_coeff(KV[0][0]*norm0[0] + KV[0][1]*norm0[1] + KV[0][2]*norm0[2], n, m, 0, 0);
  1173. write_coeff(KV[1][0]*norm0[0] + KV[1][1]*norm0[1] + KV[1][2]*norm0[2], n, m, 0, 1);
  1174. write_coeff(KV[2][0]*norm0[0] + KV[2][1]*norm0[1] + KV[2][2]*norm0[2], n, m, 0, 2);
  1175. write_coeff(KW[0][0]*norm0[0] + KW[0][1]*norm0[1] + KW[0][2]*norm0[2], n, m, 1, 0);
  1176. write_coeff(KW[1][0]*norm0[0] + KW[1][1]*norm0[1] + KW[1][2]*norm0[2], n, m, 1, 1);
  1177. write_coeff(KW[2][0]*norm0[0] + KW[2][1]*norm0[1] + KW[2][2]*norm0[2], n, m, 1, 2);
  1178. write_coeff(KX[0][0]*norm0[0] + KX[0][1]*norm0[1] + KX[0][2]*norm0[2], n, m, 2, 0);
  1179. write_coeff(KX[1][0]*norm0[0] + KX[1][1]*norm0[1] + KX[1][2]*norm0[2], n, m, 2, 1);
  1180. write_coeff(KX[2][0]*norm0[0] + KX[2][1]*norm0[1] + KX[2][2]*norm0[2], n, m, 2, 2);
  1181. }
  1182. }
  1183. }
  1184. { // Set X <-- Q * StokesOp * B1
  1185. if (X.Dim() != N * dof * COORD_DIM) X.ReInit(N * dof * COORD_DIM);
  1186. for (Long k0 = 0; k0 < N; k0++) {
  1187. StaticArray<Real,9> Q;
  1188. { // Set Q
  1189. Real cos_theta = cos_theta_phi[k0 * 2 + 0];
  1190. Real sin_theta = sqrt<Real>(1 - cos_theta * cos_theta);
  1191. Real cos_phi = cos(cos_theta_phi[k0 * 2 + 1]);
  1192. Real sin_phi = sin(cos_theta_phi[k0 * 2 + 1]);
  1193. Q[0] = sin_theta*cos_phi; Q[1] = sin_theta*sin_phi; Q[2] = cos_theta;
  1194. Q[3] = cos_theta*cos_phi; Q[4] = cos_theta*sin_phi; Q[5] =-sin_theta;
  1195. Q[6] = -sin_phi; Q[7] = cos_phi; Q[8] = 0;
  1196. }
  1197. for (Long k1 = 0; k1 < dof; k1++) { // Set X <-- Q * StokesOp * B1
  1198. StaticArray<Real,COORD_DIM> in;
  1199. for (Long j = 0; j < COORD_DIM; j++) {
  1200. in[j] = 0;
  1201. for (Long i = 0; i < COORD_DIM * M; i++) {
  1202. in[j] += B1[k1][i] * StokesOp[k0 * COORD_DIM + j][i];
  1203. }
  1204. }
  1205. X[(k0 * dof + k1) * COORD_DIM + 0] = Q[0] * in[0] + Q[3] * in[1] + Q[6] * in[2];
  1206. X[(k0 * dof + k1) * COORD_DIM + 1] = Q[1] * in[0] + Q[4] * in[1] + Q[7] * in[2];
  1207. X[(k0 * dof + k1) * COORD_DIM + 2] = Q[2] * in[0] + Q[5] * in[1] + Q[8] * in[2];
  1208. }
  1209. }
  1210. }
  1211. }
  1212. template <class Real> void SphericalHarmonics<Real>::Grid2SHC_(const Vector<Real>& X, Long Nt, Long Np, Long p1, Vector<Real>& B1){
  1213. const auto& Mf = OpFourierInv(Np);
  1214. assert(Mf.Dim(0) == Np);
  1215. const std::vector<Matrix<Real>>& Ml = SphericalHarmonics<Real>::MatLegendreInv(Nt-1,p1);
  1216. assert((Long)Ml.size() == p1+1);
  1217. Long N = X.Dim() / (Np*Nt);
  1218. assert(X.Dim() == N*Np*Nt);
  1219. Vector<Real> B0((2*p1+1) * N*Nt);
  1220. #pragma omp parallel
  1221. { // B0 <-- Transpose(FFT(X))
  1222. Integer tid=omp_get_thread_num();
  1223. Integer omp_p=omp_get_num_threads();
  1224. Long a=(tid+0)*N*Nt/omp_p;
  1225. Long b=(tid+1)*N*Nt/omp_p;
  1226. Vector<Real> buff(Mf.Dim(1));
  1227. Long fft_coeff_len = std::min(buff.Dim(), 2*p1+2);
  1228. Matrix<Real> B0_(2*p1+1, N*Nt, B0.begin(), false);
  1229. const Matrix<Real> MX(N * Nt, Np, (Iterator<Real>)X.begin(), false);
  1230. for (Long i = a; i < b; i++) {
  1231. { // buff <-- FFT(Xi)
  1232. const Vector<Real> Xi(Np, (Iterator<Real>)X.begin() + Np * i, false);
  1233. Mf.Execute(Xi, buff);
  1234. }
  1235. { // B0 <-- Transpose(buff)
  1236. B0_[0][i] = buff[0]; // skipping buff[1] == 0
  1237. for (Long j = 2; j < fft_coeff_len; j++) B0_[j-1][i] = buff[j];
  1238. for (Long j = fft_coeff_len; j < 2*p1+2; j++) B0_[j-1][i] = 0;
  1239. }
  1240. }
  1241. }
  1242. if (B1.Dim() != N*(p1+1)*(p1+1)) B1.ReInit(N*(p1+1)*(p1+1));
  1243. #pragma omp parallel
  1244. { // Evaluate Legendre polynomial
  1245. Integer tid=omp_get_thread_num();
  1246. Integer omp_p=omp_get_num_threads();
  1247. Long offset0=0;
  1248. Long offset1=0;
  1249. for (Long i = 0; i < p1+1; i++) {
  1250. Long N_ = (i==0 ? N : 2*N);
  1251. Matrix<Real> Min (N_, Nt , B0.begin()+offset0, false);
  1252. Matrix<Real> Mout(N_, p1+1-i, B1.begin()+offset1, false);
  1253. { // Mout = Min * Ml[i] // split between threads
  1254. Long a=(tid+0)*N_/omp_p;
  1255. Long b=(tid+1)*N_/omp_p;
  1256. if (a < b) {
  1257. Matrix<Real> Min_ (b-a, Min .Dim(1), Min [a], false);
  1258. Matrix<Real> Mout_(b-a, Mout.Dim(1), Mout[a], false);
  1259. Matrix<Real>::GEMM(Mout_,Min_,Ml[i]);
  1260. }
  1261. }
  1262. offset0+=Min .Dim(0)*Min .Dim(1);
  1263. offset1+=Mout.Dim(0)*Mout.Dim(1);
  1264. }
  1265. assert(offset0 == B0.Dim());
  1266. assert(offset1 == B1.Dim());
  1267. }
  1268. B1 *= 1 / sqrt<Real>(4 * const_pi<Real>() * Np); // Scaling to match Zydrunas Fortran code.
  1269. }
  1270. template <class Real> void SphericalHarmonics<Real>::SHCArrange0(const Vector<Real>& B1, Long p1, Vector<Real>& S, SHCArrange arrange){
  1271. Long M = (p1+1)*(p1+1);
  1272. Long N = B1.Dim() / M;
  1273. assert(B1.Dim() == N*M);
  1274. if (arrange == SHCArrange::ALL) { // S <-- Rearrange(B1)
  1275. Long M = 2*(p1+1)*(p1+1);
  1276. if(S.Dim() != N * M) S.ReInit(N * M);
  1277. #pragma omp parallel
  1278. { // S <-- Rearrange(B1)
  1279. Integer tid=omp_get_thread_num();
  1280. Integer omp_p=omp_get_num_threads();
  1281. Long a=(tid+0)*N/omp_p;
  1282. Long b=(tid+1)*N/omp_p;
  1283. for (Long i = a; i < b; i++) {
  1284. Long offset = 0;
  1285. for (Long j = 0; j < p1+1; j++) {
  1286. Long len = p1+1 - j;
  1287. if (1) { // Set Real(S_n^m) for m=j and n=j..p
  1288. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1289. Iterator<Real> S_ = S .begin() + i*M + j*(p1+1)*2 + j*2 + 0;
  1290. for (Long k = 0; k < len; k++) S_[k * (p1+1)*2] = B_[k];
  1291. offset += len;
  1292. }
  1293. if (j) { // Set Imag(S_n^m) for m=j and n=j..p
  1294. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1295. Iterator<Real> S_ = S .begin() + i*M + j*(p1+1)*2 + j*2 + 1;
  1296. for (Long k = 0; k < len; k++) S_[k * (p1+1)*2] = B_[k];
  1297. offset += len;
  1298. } else {
  1299. Iterator<Real> S_ = S .begin() + i*M + j*(p1+1)*2 + j*2 + 1;
  1300. for (Long k = 0; k < len; k++) S_[k * (p1+1)*2] = 0;
  1301. }
  1302. }
  1303. }
  1304. }
  1305. }
  1306. if (arrange == SHCArrange::ROW_MAJOR) { // S <-- Rearrange(B1)
  1307. Long M = (p1+1)*(p1+2);
  1308. if(S.Dim() != N * M) S.ReInit(N * M);
  1309. #pragma omp parallel
  1310. { // S <-- Rearrange(B1)
  1311. Integer tid=omp_get_thread_num();
  1312. Integer omp_p=omp_get_num_threads();
  1313. Long a=(tid+0)*N/omp_p;
  1314. Long b=(tid+1)*N/omp_p;
  1315. for (Long i = a; i < b; i++) {
  1316. Long offset = 0;
  1317. for (Long j = 0; j < p1+1; j++) {
  1318. Long len = p1+1 - j;
  1319. if (1) { // Set Real(S_n^m) for m=j and n=j..p
  1320. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1321. Iterator<Real> S_ = S .begin() + i*M + 0;
  1322. for (Long k=0;k<len;k++) S_[(j+k)*(j+k+1) + 2*j] = B_[k];
  1323. offset += len;
  1324. }
  1325. if (j) { // Set Imag(S_n^m) for m=j and n=j..p
  1326. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1327. Iterator<Real> S_ = S .begin() + i*M + 1;
  1328. for (Long k=0;k<len;k++) S_[(j+k)*(j+k+1) + 2*j] = B_[k];
  1329. offset += len;
  1330. } else {
  1331. Iterator<Real> S_ = S .begin() + i*M + 1;
  1332. for (Long k=0;k<len;k++) S_[(j+k)*(j+k+1) + 2*j] = 0;
  1333. }
  1334. }
  1335. }
  1336. }
  1337. }
  1338. if (arrange == SHCArrange::COL_MAJOR_NONZERO) { // S <-- Rearrange(B1)
  1339. Long M = (p1+1)*(p1+1);
  1340. if(S.Dim() != N * M) S.ReInit(N * M);
  1341. #pragma omp parallel
  1342. { // S <-- Rearrange(B1)
  1343. Integer tid=omp_get_thread_num();
  1344. Integer omp_p=omp_get_num_threads();
  1345. Long a=(tid+0)*N/omp_p;
  1346. Long b=(tid+1)*N/omp_p;
  1347. for (Long i = a; i < b; i++) {
  1348. Long offset = 0;
  1349. for (Long j = 0; j < p1+1; j++) {
  1350. Long len = p1+1 - j;
  1351. if (1) { // Set Real(S_n^m) for m=j and n=j..p
  1352. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1353. Iterator<Real> S_ = S .begin() + i*M + offset;
  1354. for (Long k = 0; k < len; k++) S_[k] = B_[k];
  1355. offset += len;
  1356. }
  1357. if (j) { // Set Imag(S_n^m) for m=j and n=j..p
  1358. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1359. Iterator<Real> S_ = S .begin() + i*M + offset;
  1360. for (Long k = 0; k < len; k++) S_[k] = B_[k];
  1361. offset += len;
  1362. }
  1363. }
  1364. }
  1365. }
  1366. }
  1367. }
  1368. template <class Real> void SphericalHarmonics<Real>::SHCArrange1(const Vector<Real>& S, SHCArrange arrange, Long p0, Vector<Real>& B0){
  1369. Long M, N;
  1370. { // Set M, N
  1371. M = 0;
  1372. if (arrange == SHCArrange::ALL) M = 2*(p0+1)*(p0+1);
  1373. if (arrange == SHCArrange::ROW_MAJOR) M = (p0+1)*(p0+2);
  1374. if (arrange == SHCArrange::COL_MAJOR_NONZERO) M = (p0+1)*(p0+1);
  1375. if (M == 0) return;
  1376. N = S.Dim() / M;
  1377. assert(S.Dim() == N * M);
  1378. }
  1379. if (B0.Dim() != N*(p0+1)*(p0+1)) B0.ReInit(N*(p0+1)*(p0+1));
  1380. if (arrange == SHCArrange::ALL) { // B0 <-- Rearrange(S)
  1381. #pragma omp parallel
  1382. { // B0 <-- Rearrange(S)
  1383. Integer tid=omp_get_thread_num();
  1384. Integer omp_p=omp_get_num_threads();
  1385. Long a=(tid+0)*N/omp_p;
  1386. Long b=(tid+1)*N/omp_p;
  1387. for (Long i = a; i < b; i++) {
  1388. Long offset = 0;
  1389. for (Long j = 0; j < p0+1; j++) {
  1390. Long len = p0+1 - j;
  1391. if (1) { // Get Real(S_n^m) for m=j and n=j..p
  1392. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1393. ConstIterator<Real> S_ = S .begin() + i*M + j*(p0+1)*2 + j*2 + 0;
  1394. for (Long k = 0; k < len; k++) B_[k] = S_[k * (p0+1)*2];
  1395. offset += len;
  1396. }
  1397. if (j) { // Get Imag(S_n^m) for m=j and n=j..p
  1398. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1399. ConstIterator<Real> S_ = S .begin() + i*M + j*(p0+1)*2 + j*2 + 1;
  1400. for (Long k = 0; k < len; k++) B_[k] = S_[k * (p0+1)*2];
  1401. offset += len;
  1402. }
  1403. }
  1404. }
  1405. }
  1406. }
  1407. if (arrange == SHCArrange::ROW_MAJOR) { // B0 <-- Rearrange(S)
  1408. #pragma omp parallel
  1409. { // B0 <-- Rearrange(S)
  1410. Integer tid=omp_get_thread_num();
  1411. Integer omp_p=omp_get_num_threads();
  1412. Long a=(tid+0)*N/omp_p;
  1413. Long b=(tid+1)*N/omp_p;
  1414. for (Long i = a; i < b; i++) {
  1415. Long offset = 0;
  1416. for (Long j = 0; j < p0+1; j++) {
  1417. Long len = p0+1 - j;
  1418. if (1) { // Get Real(S_n^m) for m=j and n=j..p
  1419. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1420. ConstIterator<Real> S_ = S .begin() + i*M + 0;
  1421. for (Long k=0;k<len;k++) B_[k] = S_[(j+k)*(j+k+1) + 2*j];
  1422. offset += len;
  1423. }
  1424. if (j) { // Get Imag(S_n^m) for m=j and n=j..p
  1425. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1426. ConstIterator<Real> S_ = S .begin() + i*M + 1;
  1427. for (Long k=0;k<len;k++) B_[k] = S_[(j+k)*(j+k+1) + 2*j];
  1428. offset += len;
  1429. }
  1430. }
  1431. }
  1432. }
  1433. }
  1434. if (arrange == SHCArrange::COL_MAJOR_NONZERO) { // B0 <-- Rearrange(S)
  1435. #pragma omp parallel
  1436. { // B0 <-- Rearrange(S)
  1437. Integer tid=omp_get_thread_num();
  1438. Integer omp_p=omp_get_num_threads();
  1439. Long a=(tid+0)*N/omp_p;
  1440. Long b=(tid+1)*N/omp_p;
  1441. for (Long i = a; i < b; i++) {
  1442. Long offset = 0;
  1443. for (Long j = 0; j < p0+1; j++) {
  1444. Long len = p0+1 - j;
  1445. if (1) { // Get Real(S_n^m) for m=j and n=j..p
  1446. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1447. ConstIterator<Real> S_ = S .begin() + i*M + offset;
  1448. for (Long k = 0; k < len; k++) B_[k] = S_[k];
  1449. offset += len;
  1450. }
  1451. if (j) { // Get Imag(S_n^m) for m=j and n=j..p
  1452. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1453. ConstIterator<Real> S_ = S .begin() + i*M + offset;
  1454. for (Long k = 0; k < len; k++) B_[k] = S_[k];
  1455. offset += len;
  1456. }
  1457. }
  1458. }
  1459. }
  1460. }
  1461. }
  1462. template <class Real> void SphericalHarmonics<Real>::SHC2Grid_(const Vector<Real>& B0, Long p0, Long Nt, Long Np, Vector<Real>* X, Vector<Real>* X_phi, Vector<Real>* X_theta){
  1463. const auto& Mf = OpFourier(Np);
  1464. assert(Mf.Dim(1) == Np);
  1465. const std::vector<Matrix<Real>>& Ml =SphericalHarmonics<Real>::MatLegendre (p0,Nt-1);
  1466. const std::vector<Matrix<Real>>& Mdl=SphericalHarmonics<Real>::MatLegendreGrad(p0,Nt-1);
  1467. assert((Long)Ml .size() == p0+1);
  1468. assert((Long)Mdl.size() == p0+1);
  1469. Long N = B0.Dim() / ((p0+1)*(p0+1));
  1470. assert(B0.Dim() == N*(p0+1)*(p0+1));
  1471. if(X && X ->Dim()!=N*Np*Nt) X ->ReInit(N*Np*Nt);
  1472. if(X_theta && X_theta->Dim()!=N*Np*Nt) X_theta->ReInit(N*Np*Nt);
  1473. if(X_phi && X_phi ->Dim()!=N*Np*Nt) X_phi ->ReInit(N*Np*Nt);
  1474. Vector<Real> B1(N*(2*p0+1)*Nt);
  1475. if(X || X_phi){
  1476. #pragma omp parallel
  1477. { // Evaluate Legendre polynomial
  1478. Integer tid=omp_get_thread_num();
  1479. Integer omp_p=omp_get_num_threads();
  1480. Long offset0=0;
  1481. Long offset1=0;
  1482. for(Long i=0;i<p0+1;i++){
  1483. Long N_ = (i==0 ? N : 2*N);
  1484. const Matrix<Real> Min (N_, p0+1-i, (Iterator<Real>)B0.begin()+offset0, false);
  1485. Matrix<Real> Mout(N_, Nt , B1.begin()+offset1, false);
  1486. { // Mout = Min * Ml[i] // split between threads
  1487. Long a=(tid+0)*N_/omp_p;
  1488. Long b=(tid+1)*N_/omp_p;
  1489. if(a<b){
  1490. const Matrix<Real> Min_ (b-a, Min .Dim(1), (Iterator<Real>)Min [a], false);
  1491. Matrix<Real> Mout_(b-a, Mout.Dim(1), Mout[a], false);
  1492. Matrix<Real>::GEMM(Mout_,Min_,Ml[i]);
  1493. }
  1494. }
  1495. offset0+=Min .Dim(0)*Min .Dim(1);
  1496. offset1+=Mout.Dim(0)*Mout.Dim(1);
  1497. }
  1498. }
  1499. B1 *= sqrt<Real>(4 * const_pi<Real>() * Np); // Scaling to match Zydrunas Fortran code.
  1500. #pragma omp parallel
  1501. { // Transpose and evaluate Fourier
  1502. Integer tid=omp_get_thread_num();
  1503. Integer omp_p=omp_get_num_threads();
  1504. Long a=(tid+0)*N*Nt/omp_p;
  1505. Long b=(tid+1)*N*Nt/omp_p;
  1506. Vector<Real> buff(Mf.Dim(0)); buff = 0;
  1507. Long fft_coeff_len = std::min(buff.Dim(), 2*p0+2);
  1508. Matrix<Real> B1_(2*p0+1, N*Nt, B1.begin(), false);
  1509. for (Long i = a; i < b; i++) {
  1510. { // buff <-- Transpose(B1)
  1511. buff[0] = B1_[0][i];
  1512. buff[1] = 0;
  1513. for (Long j = 2; j < fft_coeff_len; j++) buff[j] = B1_[j-1][i];
  1514. for (Long j = fft_coeff_len; j < buff.Dim(); j++) buff[j] = 0;
  1515. }
  1516. { // X <-- FFT(buff)
  1517. Vector<Real> Xi(Np, X->begin() + Np * i, false);
  1518. Mf.Execute(buff, Xi);
  1519. }
  1520. if(X_phi){ // Evaluate Fourier gradient
  1521. { // buff <-- Transpose(B1)
  1522. buff[0] = 0;
  1523. buff[1] = 0;
  1524. for (Long j = 2; j < fft_coeff_len; j++) buff[j] = B1_[j-1][i];
  1525. for (Long j = fft_coeff_len; j < buff.Dim(); j++) buff[j] = 0;
  1526. for (Long j = 1; j < buff.Dim()/2; j++) {
  1527. Real x = buff[2*j+0];
  1528. Real y = buff[2*j+1];
  1529. buff[2*j+0] = -j*y;
  1530. buff[2*j+1] = j*x;
  1531. }
  1532. }
  1533. { // X_phi <-- FFT(buff)
  1534. Vector<Real> Xi(Np, X_phi->begin() + Np * i, false);
  1535. Mf.Execute(buff, Xi);
  1536. }
  1537. }
  1538. }
  1539. }
  1540. }
  1541. if(X_theta){
  1542. #pragma omp parallel
  1543. { // Evaluate Legendre gradient
  1544. Integer tid=omp_get_thread_num();
  1545. Integer omp_p=omp_get_num_threads();
  1546. Long offset0=0;
  1547. Long offset1=0;
  1548. for(Long i=0;i<p0+1;i++){
  1549. Long N_ = (i==0 ? N : 2*N);
  1550. const Matrix<Real> Min (N_, p0+1-i, (Iterator<Real>)B0.begin()+offset0, false);
  1551. Matrix<Real> Mout(N_, Nt , B1.begin()+offset1, false);
  1552. { // Mout = Min * Mdl[i] // split between threads
  1553. Long a=(tid+0)*N_/omp_p;
  1554. Long b=(tid+1)*N_/omp_p;
  1555. if(a<b){
  1556. const Matrix<Real> Min_ (b-a, Min .Dim(1), (Iterator<Real>)Min [a], false);
  1557. Matrix<Real> Mout_(b-a, Mout.Dim(1), Mout[a], false);
  1558. Matrix<Real>::GEMM(Mout_,Min_,Mdl[i]);
  1559. }
  1560. }
  1561. offset0+=Min .Dim(0)*Min .Dim(1);
  1562. offset1+=Mout.Dim(0)*Mout.Dim(1);
  1563. }
  1564. }
  1565. B1 *= sqrt<Real>(4 * const_pi<Real>() * Np); // Scaling to match Zydrunas Fortran code.
  1566. #pragma omp parallel
  1567. { // Transpose and evaluate Fourier
  1568. Integer tid=omp_get_thread_num();
  1569. Integer omp_p=omp_get_num_threads();
  1570. Long a=(tid+0)*N*Nt/omp_p;
  1571. Long b=(tid+1)*N*Nt/omp_p;
  1572. Vector<Real> buff(Mf.Dim(0)); buff = 0;
  1573. Long fft_coeff_len = std::min(buff.Dim(), 2*p0+2);
  1574. Matrix<Real> B1_(2*p0+1, N*Nt, B1.begin(), false);
  1575. for (Long i = a; i < b; i++) {
  1576. { // buff <-- Transpose(B1)
  1577. buff[0] = B1_[0][i];
  1578. buff[1] = 0;
  1579. for (Long j = 2; j < fft_coeff_len; j++) buff[j] = B1_[j-1][i];
  1580. for (Long j = fft_coeff_len; j < buff.Dim(); j++) buff[j] = 0;
  1581. }
  1582. { // Xi <-- FFT(buff)
  1583. Vector<Real> Xi(Np, X_theta->begin() + Np * i, false);
  1584. Mf.Execute(buff, Xi);
  1585. }
  1586. }
  1587. }
  1588. }
  1589. }
  1590. template <class Real> void SphericalHarmonics<Real>::LegPoly(Vector<Real>& poly_val, const Vector<Real>& X, Long degree){
  1591. Long N = X.Dim();
  1592. Long Npoly = (degree + 1) * (degree + 2) / 2;
  1593. if (poly_val.Dim() != Npoly * N) poly_val.ReInit(Npoly * N);
  1594. Real fact = 1 / sqrt<Real>(4 * const_pi<Real>());
  1595. Vector<Real> u(N);
  1596. for (Long n = 0; n < N; n++) {
  1597. u[n] = (X[n]*X[n]<1 ? sqrt<Real>(1-X[n]*X[n]) : 0);
  1598. poly_val[n] = fact;
  1599. }
  1600. Long idx = 0;
  1601. Long idx_nxt = 0;
  1602. for (Long i = 1; i <= degree; i++) {
  1603. idx_nxt += N*(degree-i+2);
  1604. Real c = sqrt<Real>((2*i+1)/(Real)(2*i));
  1605. for (Long n = 0; n < N; n++) {
  1606. poly_val[idx_nxt+n] = -poly_val[idx+n] * u[n] * c;
  1607. }
  1608. idx = idx_nxt;
  1609. }
  1610. idx = 0;
  1611. for (Long m = 0; m < degree; m++) {
  1612. for (Long n = 0; n < N; n++) {
  1613. Real pmm = 0;
  1614. Real pmmp1 = poly_val[idx+n];
  1615. for (Long ll = m + 1; ll <= degree; ll++) {
  1616. Real a = sqrt<Real>(((2*ll-1)*(2*ll+1) ) / (Real)((ll-m)*(ll+m) ));
  1617. Real b = sqrt<Real>(((2*ll+1)*(ll+m-1)*(ll-m-1)) / (Real)((ll-m)*(ll+m)*(2*ll-3)));
  1618. Real pll = X[n]*a*pmmp1 - b*pmm;
  1619. pmm = pmmp1;
  1620. pmmp1 = pll;
  1621. poly_val[idx + N*(ll-m) + n] = pll;
  1622. }
  1623. }
  1624. idx += N * (degree - m + 1);
  1625. }
  1626. }
  1627. template <class Real> void SphericalHarmonics<Real>::LegPolyDeriv(Vector<Real>& poly_val, const Vector<Real>& X, Long degree){
  1628. Long N = X.Dim();
  1629. Long Npoly = (degree + 1) * (degree + 2) / 2;
  1630. if (poly_val.Dim() != N * Npoly) poly_val.ReInit(N * Npoly);
  1631. Vector<Real> leg_poly(Npoly * N);
  1632. LegPoly(leg_poly, X, degree);
  1633. for (Long m = 0; m <= degree; m++) {
  1634. for (Long n = m; n <= degree; n++) {
  1635. ConstIterator<Real> Pn = leg_poly.begin() + N * ((degree * 2 - m + 1) * (m + 0) / 2 + n);
  1636. ConstIterator<Real> Pn_ = leg_poly.begin() + N * ((degree * 2 - m + 0) * (m + 1) / 2 + n) * (m < n);
  1637. Iterator <Real> Hn = poly_val.begin() + N * ((degree * 2 - m + 1) * (m + 0) / 2 + n);
  1638. Real c2 = sqrt<Real>(m<n ? (n+m+1)*(n-m) : 0);
  1639. for (Long i = 0; i < N; i++) {
  1640. Real c1 = (X[i]*X[i]<1 ? m/sqrt<Real>(1-X[i]*X[i]) : 0);
  1641. Hn[i] = c1*X[i]*Pn[i] + c2*Pn_[i];
  1642. }
  1643. }
  1644. }
  1645. }
  1646. template <class Real> const Vector<Real>& SphericalHarmonics<Real>::LegendreNodes(Long p){
  1647. assert(p<SCTL_SHMAXDEG);
  1648. Vector<Real>& Qx=MatrixStore().Qx_[p];
  1649. if(!Qx.Dim()){
  1650. Vector<double> qx1(p+1);
  1651. Vector<double> qw1(p+1);
  1652. cgqf(p+1, 1, 0.0, 0.0, -1.0, 1.0, &qx1[0], &qw1[0]);
  1653. assert(typeid(Real) == typeid(double) || typeid(Real) == typeid(float)); // TODO: works only for float and double
  1654. if (Qx.Dim() != p+1) Qx.ReInit(p+1);
  1655. for (Long i = 0; i < p + 1; i++) Qx[i] = -qx1[i];
  1656. }
  1657. return Qx;
  1658. }
  1659. template <class Real> const Vector<Real>& SphericalHarmonics<Real>::LegendreWeights(Long p){
  1660. assert(p<SCTL_SHMAXDEG);
  1661. Vector<Real>& Qw=MatrixStore().Qw_[p];
  1662. if(!Qw.Dim()){
  1663. Vector<double> qx1(p+1);
  1664. Vector<double> qw1(p+1);
  1665. cgqf(p+1, 1, 0.0, 0.0, -1.0, 1.0, &qx1[0], &qw1[0]);
  1666. assert(typeid(Real) == typeid(double) || typeid(Real) == typeid(float)); // TODO: works only for float and double
  1667. if (Qw.Dim() != p+1) Qw.ReInit(p+1);
  1668. for (Long i = 0; i < p + 1; i++) Qw[i] = qw1[i];
  1669. }
  1670. return Qw;
  1671. }
  1672. template <class Real> const Vector<Real>& SphericalHarmonics<Real>::SingularWeights(Long p1){
  1673. assert(p1<SCTL_SHMAXDEG);
  1674. Vector<Real>& Sw=MatrixStore().Sw_[p1];
  1675. if(!Sw.Dim()){
  1676. const Vector<Real>& qx1 = LegendreNodes(p1);
  1677. const Vector<Real>& qw1 = LegendreWeights(p1);
  1678. std::vector<Real> Yf(p1+1,0);
  1679. { // Set Yf
  1680. Vector<Real> x0(1); x0=1.0;
  1681. Vector<Real> alp0((p1+1)*(p1+2)/2);
  1682. LegPoly(alp0, x0, p1);
  1683. Vector<Real> alp((p1+1) * (p1+1)*(p1+2)/2);
  1684. LegPoly(alp, qx1, p1);
  1685. for(Long j=0;j<p1+1;j++){
  1686. for(Long i=0;i<p1+1;i++){
  1687. Yf[i]+=4*M_PI/(2*j+1) * alp0[j] * alp[j*(p1+1)+i];
  1688. }
  1689. }
  1690. }
  1691. Sw.ReInit(p1+1);
  1692. for(Long i=0;i<p1+1;i++){
  1693. Sw[i]=(qw1[i]*M_PI/p1)*Yf[i]/cos(acos(qx1[i])/2);
  1694. }
  1695. }
  1696. return Sw;
  1697. }
  1698. template <class Real> const Matrix<Real>& SphericalHarmonics<Real>::MatFourier(Long p0, Long p1){
  1699. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  1700. Matrix<Real>& Mf =MatrixStore().Mf_ [p0*SCTL_SHMAXDEG+p1];
  1701. if(!Mf.Dim(0)){
  1702. const Real SQRT2PI=sqrt(2*M_PI);
  1703. { // Set Mf
  1704. Matrix<Real> M(2*p0,2*p1);
  1705. for(Long j=0;j<2*p1;j++){
  1706. M[0][j]=SQRT2PI*1.0;
  1707. for(Long k=1;k<p0;k++){
  1708. M[2*k-1][j]=SQRT2PI*cos(j*k*M_PI/p1);
  1709. M[2*k-0][j]=SQRT2PI*sin(j*k*M_PI/p1);
  1710. }
  1711. M[2*p0-1][j]=SQRT2PI*cos(j*p0*M_PI/p1);
  1712. }
  1713. Mf=M;
  1714. }
  1715. }
  1716. return Mf;
  1717. }
  1718. template <class Real> const Matrix<Real>& SphericalHarmonics<Real>::MatFourierInv(Long p0, Long p1){
  1719. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  1720. Matrix<Real>& Mf =MatrixStore().Mfinv_ [p0*SCTL_SHMAXDEG+p1];
  1721. if(!Mf.Dim(0)){
  1722. const Real INVSQRT2PI=1.0/sqrt(2*M_PI)/p0;
  1723. { // Set Mf
  1724. Matrix<Real> M(2*p0,2*p1);
  1725. M.SetZero();
  1726. if(p1>p0) p1=p0;
  1727. for(Long j=0;j<2*p0;j++){
  1728. M[j][0]=INVSQRT2PI*0.5;
  1729. for(Long k=1;k<p1;k++){
  1730. M[j][2*k-1]=INVSQRT2PI*cos(j*k*M_PI/p0);
  1731. M[j][2*k-0]=INVSQRT2PI*sin(j*k*M_PI/p0);
  1732. }
  1733. M[j][2*p1-1]=INVSQRT2PI*cos(j*p1*M_PI/p0);
  1734. }
  1735. if(p1==p0) for(Long j=0;j<2*p0;j++) M[j][2*p1-1]*=0.5;
  1736. Mf=M;
  1737. }
  1738. }
  1739. return Mf;
  1740. }
  1741. template <class Real> const Matrix<Real>& SphericalHarmonics<Real>::MatFourierGrad(Long p0, Long p1){
  1742. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  1743. Matrix<Real>& Mdf=MatrixStore().Mdf_[p0*SCTL_SHMAXDEG+p1];
  1744. if(!Mdf.Dim(0)){
  1745. const Real SQRT2PI=sqrt(2*M_PI);
  1746. { // Set Mdf_
  1747. Matrix<Real> M(2*p0,2*p1);
  1748. for(Long j=0;j<2*p1;j++){
  1749. M[0][j]=SQRT2PI*0.0;
  1750. for(Long k=1;k<p0;k++){
  1751. M[2*k-1][j]=-SQRT2PI*k*sin(j*k*M_PI/p1);
  1752. M[2*k-0][j]= SQRT2PI*k*cos(j*k*M_PI/p1);
  1753. }
  1754. M[2*p0-1][j]=-SQRT2PI*p0*sin(j*p0*M_PI/p1);
  1755. }
  1756. Mdf=M;
  1757. }
  1758. }
  1759. return Mdf;
  1760. }
  1761. template <class Real> const FFT<Real>& SphericalHarmonics<Real>::OpFourier(Long Np){
  1762. assert(Np<SCTL_SHMAXDEG);
  1763. auto& Mf =MatrixStore().Mfftinv_ [Np];
  1764. #pragma omp critical (SCTL_FFT_PLAN0)
  1765. if(!Mf.Dim(0)){
  1766. StaticArray<Long,1> fft_dim = {Np};
  1767. Mf.Setup(FFT_Type::C2R, 1, Vector<Long>(1,fft_dim,false));
  1768. }
  1769. return Mf;
  1770. }
  1771. template <class Real> const FFT<Real>& SphericalHarmonics<Real>::OpFourierInv(Long Np){
  1772. assert(Np<SCTL_SHMAXDEG);
  1773. auto& Mf =MatrixStore().Mfft_ [Np];
  1774. #pragma omp critical (SCTL_FFT_PLAN1)
  1775. if(!Mf.Dim(0)){
  1776. StaticArray<Long,1> fft_dim = {Np};
  1777. Mf.Setup(FFT_Type::R2C, 1, Vector<Long>(1,fft_dim,false));
  1778. }
  1779. return Mf;
  1780. }
  1781. template <class Real> const std::vector<Matrix<Real>>& SphericalHarmonics<Real>::MatLegendre(Long p0, Long p1){
  1782. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  1783. std::vector<Matrix<Real>>& Ml =MatrixStore().Ml_ [p0*SCTL_SHMAXDEG+p1];
  1784. if(!Ml.size()){
  1785. const Vector<Real>& qx1 = LegendreNodes(p1);
  1786. Vector<Real> alp(qx1.Dim()*(p0+1)*(p0+2)/2);
  1787. LegPoly(alp, qx1, p0);
  1788. Ml.resize(p0+1);
  1789. auto ptr = alp.begin();
  1790. for(Long i=0;i<=p0;i++){
  1791. Ml[i].ReInit(p0+1-i, qx1.Dim(), ptr);
  1792. ptr+=Ml[i].Dim(0)*Ml[i].Dim(1);
  1793. }
  1794. }
  1795. return Ml;
  1796. }
  1797. template <class Real> const std::vector<Matrix<Real>>& SphericalHarmonics<Real>::MatLegendreInv(Long p0, Long p1){
  1798. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  1799. std::vector<Matrix<Real>>& Ml =MatrixStore().Mlinv_ [p0*SCTL_SHMAXDEG+p1];
  1800. if(!Ml.size()){
  1801. const Vector<Real>& qx1 = LegendreNodes(p0);
  1802. const Vector<Real>& qw1 = LegendreWeights(p0);
  1803. Vector<Real> alp(qx1.Dim()*(p1+1)*(p1+2)/2);
  1804. LegPoly(alp, qx1, p1);
  1805. Ml.resize(p1+1);
  1806. auto ptr = alp.begin();
  1807. for(Long i=0;i<=p1;i++){
  1808. Ml[i].ReInit(qx1.Dim(), p1+1-i);
  1809. Matrix<Real> M(p1+1-i, qx1.Dim(), ptr, false);
  1810. for(Long j=0;j<p1+1-i;j++){ // Transpose and weights
  1811. for(Long k=0;k<qx1.Dim();k++){
  1812. Ml[i][k][j]=M[j][k]*qw1[k]*2*M_PI;
  1813. }
  1814. }
  1815. ptr+=Ml[i].Dim(0)*Ml[i].Dim(1);
  1816. }
  1817. }
  1818. return Ml;
  1819. }
  1820. template <class Real> const std::vector<Matrix<Real>>& SphericalHarmonics<Real>::MatLegendreGrad(Long p0, Long p1){
  1821. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  1822. std::vector<Matrix<Real>>& Mdl=MatrixStore().Mdl_[p0*SCTL_SHMAXDEG+p1];
  1823. if(!Mdl.size()){
  1824. const Vector<Real>& qx1 = LegendreNodes(p1);
  1825. Vector<Real> alp(qx1.Dim()*(p0+1)*(p0+2)/2);
  1826. LegPolyDeriv(alp, qx1, p0);
  1827. Mdl.resize(p0+1);
  1828. auto ptr = alp.begin();
  1829. for(Long i=0;i<=p0;i++){
  1830. Mdl[i].ReInit(p0+1-i, qx1.Dim(), ptr);
  1831. ptr+=Mdl[i].Dim(0)*Mdl[i].Dim(1);
  1832. }
  1833. }
  1834. return Mdl;
  1835. }
  1836. template <class Real> void SphericalHarmonics<Real>::SHBasisEval(Long p0, const Vector<Real>& cos_theta_phi, Matrix<Real>& SHBasis) {
  1837. Long M = (p0+1) * (p0+1);
  1838. Long N = cos_theta_phi.Dim() / 2;
  1839. assert(cos_theta_phi.Dim() == N * 2);
  1840. Vector<Complex<Real>> exp_phi(N);
  1841. Matrix<Real> LegP((p0+1)*(p0+2)/2, N);
  1842. { // Set exp_phi, LegP
  1843. Vector<Real> cos_theta(N);
  1844. for (Long i = 0; i < N; i++) { // Set cos_theta, exp_phi
  1845. cos_theta[i] = cos_theta_phi[i*2+0];
  1846. exp_phi[i].real = cos<Real>(cos_theta_phi[i*2+1]);
  1847. exp_phi[i].imag = sin<Real>(cos_theta_phi[i*2+1]);
  1848. }
  1849. Vector<Real> alp(LegP.Dim(0) * LegP.Dim(1), LegP.begin(), false);
  1850. LegPoly(alp, cos_theta, p0);
  1851. }
  1852. { // Set SHBasis
  1853. SHBasis.ReInit(N, M);
  1854. Real s = 4 * sqrt<Real>(const_pi<Real>());
  1855. for (Long k0 = 0; k0 < N; k0++) {
  1856. Complex<Real> exp_phi_ = 1;
  1857. Complex<Real> exp_phi1 = exp_phi[k0];
  1858. for (Long m = 0; m <= p0; m++) {
  1859. for (Long n = m; n <= p0; n++) {
  1860. Long poly_idx = (2 * p0 - m + 1) * m / 2 + n;
  1861. Long basis_idx = (2 * p0 - m + 2) * m - (m ? p0+1 : 0) + n;
  1862. SHBasis[k0][basis_idx] = LegP[poly_idx][k0] * exp_phi_.real * s;
  1863. if (m) { // imaginary part
  1864. basis_idx += (p0+1-m);
  1865. SHBasis[k0][basis_idx] = -LegP[poly_idx][k0] * exp_phi_.imag * s;
  1866. } else {
  1867. SHBasis[k0][basis_idx] = SHBasis[k0][basis_idx] * 0.5;
  1868. }
  1869. }
  1870. exp_phi_ = exp_phi_ * exp_phi1;
  1871. }
  1872. }
  1873. }
  1874. assert(SHBasis.Dim(0) == N);
  1875. assert(SHBasis.Dim(1) == M);
  1876. }
  1877. template <class Real> void SphericalHarmonics<Real>::VecSHBasisEval(Long p0, const Vector<Real>& cos_theta_phi, Matrix<Real>& SHBasis) {
  1878. Long M = (p0+1) * (p0+1);
  1879. Long N = cos_theta_phi.Dim() / 2;
  1880. assert(cos_theta_phi.Dim() == N * 2);
  1881. Long p_ = p0 + 1;
  1882. Long M_ = (p_+1) * (p_+1);
  1883. Matrix<Real> Ynm(N, M_);
  1884. SHBasisEval(p_, cos_theta_phi, Ynm);
  1885. Vector<Real> cos_theta(N);
  1886. for (Long i = 0; i < N; i++) { // Set cos_theta
  1887. cos_theta[i] = cos_theta_phi[i*2+0];
  1888. }
  1889. { // Set SHBasis
  1890. SHBasis.ReInit(N * COORD_DIM, COORD_DIM * M);
  1891. SHBasis = 0;
  1892. const Complex<Real> imag(0,1);
  1893. for (Long i = 0; i < N; i++) {
  1894. auto Y = [p_, &Ynm, i](Long n, Long m) {
  1895. Complex<Real> c;
  1896. if (0 <= m && m <= n && n <= p_) {
  1897. Long idx = (2 * p_ - m + 2) * m - (m ? p_+1 : 0) + n;
  1898. c.real = Ynm[i][idx];
  1899. if (m) {
  1900. idx += (p_+1-m);
  1901. c.imag = Ynm[i][idx];
  1902. }
  1903. }
  1904. return c;
  1905. };
  1906. auto write_coeff = [p0, &SHBasis, i, M](Complex<Real> c, Long n, Long m, Long k0, Long k1) {
  1907. if (0 <= m && m <= n && n <= p0 && 0 <= k0 && k0 < COORD_DIM && 0 <= k1 && k1 < COORD_DIM) {
  1908. Long idx = (2 * p0 - m + 2) * m - (m ? p0+1 : 0) + n;
  1909. SHBasis[i * COORD_DIM + k1][k0 * M + idx] = c.real;
  1910. if (m) {
  1911. idx += (p0+1-m);
  1912. SHBasis[i * COORD_DIM + k1][k0 * M + idx] = c.imag;
  1913. }
  1914. }
  1915. };
  1916. auto A = [p_](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>(n*n * ((n+1)*(n+1) - m*m) / (Real)((2*n+1)*(2*n+3))) : 0); };
  1917. auto B = [p_](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>((n+1)*(n+1) * (n*n - m*m) / (Real)((2*n+1)*(2*n-1))) : 0); };
  1918. Real csc_theta = 1 / sqrt<Real>(1 - cos_theta[i] * cos_theta[i]);
  1919. if (fabs(cos_theta[i]) < 1) {
  1920. for (Long m = 0; m <= p0; m++) {
  1921. for (Long n = m; n <= p0; n++) {
  1922. Complex<Real> AYBY = A(n,m) * Y(n+1,m) - B(n,m) * Y(n-1,m);
  1923. Complex<Real> Fv2r = Y(n,m) * (-n-1);
  1924. Complex<Real> Fw2r = Y(n,m) * n;
  1925. Complex<Real> Fx2r = 0;
  1926. Complex<Real> Fv2t = AYBY * csc_theta;
  1927. Complex<Real> Fw2t = AYBY * csc_theta;
  1928. Complex<Real> Fx2t = imag * m * Y(n,m) * csc_theta;
  1929. Complex<Real> Fv2p = -imag * m * Y(n,m) * csc_theta;
  1930. Complex<Real> Fw2p = -imag * m * Y(n,m) * csc_theta;
  1931. Complex<Real> Fx2p = AYBY * csc_theta;
  1932. write_coeff(Fv2r, n, m, 0, 0);
  1933. write_coeff(Fw2r, n, m, 1, 0);
  1934. write_coeff(Fx2r, n, m, 2, 0);
  1935. write_coeff(Fv2t, n, m, 0, 1);
  1936. write_coeff(Fw2t, n, m, 1, 1);
  1937. write_coeff(Fx2t, n, m, 2, 1);
  1938. write_coeff(Fv2p, n, m, 0, 2);
  1939. write_coeff(Fw2p, n, m, 1, 2);
  1940. write_coeff(Fx2p, n, m, 2, 2);
  1941. }
  1942. }
  1943. } else {
  1944. Complex<Real> exp_phi;
  1945. exp_phi.real = cos<Real>(cos_theta_phi[i*2+1]);
  1946. exp_phi.imag = -sin<Real>(cos_theta_phi[i*2+1]);
  1947. for (Long m = 0; m <= p0; m++) {
  1948. for (Long n = m; n <= p0; n++) {
  1949. Complex<Real> Fv2r = 0;
  1950. Complex<Real> Fw2r = 0;
  1951. Complex<Real> Fx2r = 0;
  1952. Complex<Real> Fv2t = 0;
  1953. Complex<Real> Fw2t = 0;
  1954. Complex<Real> Fx2t = 0;
  1955. Complex<Real> Fv2p = 0;
  1956. Complex<Real> Fw2p = 0;
  1957. Complex<Real> Fx2p = 0;
  1958. if (m == 0) {
  1959. Fv2r = Y(n,m) * (-n-1);
  1960. Fw2r = Y(n,m) * n;
  1961. Fx2r = 0;
  1962. }
  1963. if (m == 1) {
  1964. auto Ycsc = [&cos_theta, &exp_phi, i](Long n) { return -sqrt<Real>((2*n+1)*n*(n+1)) * ((n%2==0) && (cos_theta[i]<0) ? -1 : 1) * exp_phi; };
  1965. Complex<Real> AYBY = A(n,m) * Ycsc(n+1) - B(n,m) * Ycsc(n-1);
  1966. Fv2t = AYBY;
  1967. Fw2t = AYBY;
  1968. Fx2t = imag * m * Ycsc(n);
  1969. Fv2p =-imag * m * Ycsc(n);
  1970. Fw2p =-imag * m * Ycsc(n);
  1971. Fx2p = AYBY;
  1972. }
  1973. write_coeff(Fv2r, n, m, 0, 0);
  1974. write_coeff(Fw2r, n, m, 1, 0);
  1975. write_coeff(Fx2r, n, m, 2, 0);
  1976. write_coeff(Fv2t, n, m, 0, 1);
  1977. write_coeff(Fw2t, n, m, 1, 1);
  1978. write_coeff(Fx2t, n, m, 2, 1);
  1979. write_coeff(Fv2p, n, m, 0, 2);
  1980. write_coeff(Fw2p, n, m, 1, 2);
  1981. write_coeff(Fx2p, n, m, 2, 2);
  1982. }
  1983. }
  1984. }
  1985. }
  1986. }
  1987. assert(SHBasis.Dim(0) == N * COORD_DIM);
  1988. assert(SHBasis.Dim(1) == COORD_DIM * M);
  1989. }
  1990. template <class Real> const std::vector<Matrix<Real>>& SphericalHarmonics<Real>::MatRotate(Long p0){
  1991. std::vector<std::vector<Long>> coeff_perm(p0+1);
  1992. { // Set coeff_perm
  1993. for(Long n=0;n<=p0;n++) coeff_perm[n].resize(std::min(2*n+1,2*p0));
  1994. Long itr=0;
  1995. for(Long i=0;i<2*p0;i++){
  1996. Long m=(i+1)/2;
  1997. for(Long n=m;n<=p0;n++){
  1998. coeff_perm[n][i]=itr;
  1999. itr++;
  2000. }
  2001. }
  2002. }
  2003. assert(p0<SCTL_SHMAXDEG);
  2004. std::vector<Matrix<Real>>& Mr=MatrixStore().Mr_[p0];
  2005. if(!Mr.size()){
  2006. const Real SQRT2PI=sqrt(2*M_PI);
  2007. Long Ncoef=p0*(p0+2);
  2008. Long Ngrid=2*p0*(p0+1);
  2009. Long Naleg=(p0+1)*(p0+2)/2;
  2010. Matrix<Real> Mcoord0(3,Ngrid);
  2011. const Vector<Real>& x=LegendreNodes(p0);
  2012. for(Long i=0;i<p0+1;i++){ // Set Mcoord0
  2013. for(Long j=0;j<2*p0;j++){
  2014. Mcoord0[0][i*2*p0+j]=x[i];
  2015. Mcoord0[1][i*2*p0+j]=sqrt(1-x[i]*x[i])*sin(M_PI*j/p0);
  2016. Mcoord0[2][i*2*p0+j]=sqrt(1-x[i]*x[i])*cos(M_PI*j/p0);
  2017. }
  2018. }
  2019. for(Long l=0;l<p0+1;l++){ // For each rotation angle
  2020. Matrix<Real> Mcoord1;
  2021. { // Rotate coordinates
  2022. Matrix<Real> M(COORD_DIM, COORD_DIM);
  2023. Real cos_=-x[l];
  2024. Real sin_=-sqrt(1.0-x[l]*x[l]);
  2025. M[0][0]= cos_; M[0][1]=0; M[0][2]=-sin_;
  2026. M[1][0]= 0; M[1][1]=1; M[1][2]= 0;
  2027. M[2][0]= sin_; M[2][1]=0; M[2][2]= cos_;
  2028. Mcoord1=M*Mcoord0;
  2029. }
  2030. Matrix<Real> Mleg(Naleg, Ngrid);
  2031. { // Set Mleg
  2032. const Vector<Real> Vcoord1(Mcoord1.Dim(0)*Mcoord1.Dim(1), Mcoord1.begin(), false);
  2033. Vector<Real> Vleg(Mleg.Dim(0)*Mleg.Dim(1), Mleg.begin(), false);
  2034. LegPoly(Vleg, Vcoord1, p0);
  2035. }
  2036. Vector<Real> theta(Ngrid);
  2037. for(Long i=0;i<theta.Dim();i++){ // Set theta
  2038. theta[i]=atan2(Mcoord1[1][i],Mcoord1[2][i]); // TODO: works only for float and double
  2039. }
  2040. Matrix<Real> Mcoef2grid(Ncoef, Ngrid);
  2041. { // Build Mcoef2grid
  2042. Long offset0=0;
  2043. Long offset1=0;
  2044. for(Long i=0;i<p0+1;i++){
  2045. Long len=p0+1-i;
  2046. { // P * cos
  2047. for(Long j=0;j<len;j++){
  2048. for(Long k=0;k<Ngrid;k++){
  2049. Mcoef2grid[offset1+j][k]=SQRT2PI*Mleg[offset0+j][k]*cos(i*theta[k]);
  2050. }
  2051. }
  2052. offset1+=len;
  2053. }
  2054. if(i!=0 && i!=p0){ // P * sin
  2055. for(Long j=0;j<len;j++){
  2056. for(Long k=0;k<Ngrid;k++){
  2057. Mcoef2grid[offset1+j][k]=SQRT2PI*Mleg[offset0+j][k]*sin(i*theta[k]);
  2058. }
  2059. }
  2060. offset1+=len;
  2061. }
  2062. offset0+=len;
  2063. }
  2064. assert(offset0==Naleg);
  2065. assert(offset1==Ncoef);
  2066. }
  2067. Vector<Real> Vcoef2coef(Ncoef*Ncoef);
  2068. Vector<Real> Vcoef2grid(Ncoef*Ngrid, Mcoef2grid[0], false);
  2069. Grid2SHC(Vcoef2grid, p0+1, 2*p0, p0, Vcoef2coef, SHCArrange::COL_MAJOR_NONZERO);
  2070. Matrix<Real> Mcoef2coef(Ncoef, Ncoef, Vcoef2coef.begin(), false);
  2071. for(Long n=0;n<=p0;n++){ // Create matrices for fast rotation
  2072. Matrix<Real> M(coeff_perm[n].size(),coeff_perm[n].size());
  2073. for(Long i=0;i<(Long)coeff_perm[n].size();i++){
  2074. for(Long j=0;j<(Long)coeff_perm[n].size();j++){
  2075. M[i][j]=Mcoef2coef[coeff_perm[n][i]][coeff_perm[n][j]];
  2076. }
  2077. }
  2078. Mr.push_back(M);
  2079. }
  2080. }
  2081. }
  2082. return Mr;
  2083. }
  2084. template <class Real> void SphericalHarmonics<Real>::SHC2GridTranspose(const Vector<Real>& X, Long p0, Long p1, Vector<Real>& S){
  2085. Matrix<Real> Mf =SphericalHarmonics<Real>::MatFourier(p1,p0).Transpose();
  2086. std::vector<Matrix<Real>> Ml =SphericalHarmonics<Real>::MatLegendre(p1,p0);
  2087. for(Long i=0;i<(Long)Ml.size();i++) Ml[i]=Ml[i].Transpose();
  2088. assert(p1==(Long)Ml.size()-1);
  2089. assert(p0==Mf.Dim(0)/2);
  2090. assert(p1==Mf.Dim(1)/2);
  2091. Long N=X.Dim()/(2*p0*(p0+1));
  2092. assert(N*2*p0*(p0+1)==X.Dim());
  2093. if(S.Dim()!=N*(p1*(p1+2))) S.ReInit(N*(p1*(p1+2)));
  2094. Vector<Real> B0, B1;
  2095. B0.ReInit(N* p1*(p1+2));
  2096. B1.ReInit(N*2*p1*(p0+1));
  2097. #pragma omp parallel
  2098. { // Evaluate Fourier and transpose
  2099. Integer tid=omp_get_thread_num();
  2100. Integer omp_p=omp_get_num_threads();
  2101. Long a=(tid+0)*N*(p0+1)/omp_p;
  2102. Long b=(tid+1)*N*(p0+1)/omp_p;
  2103. const Long block_size=16;
  2104. Matrix<Real> B2(block_size,2*p1);
  2105. for(Long i0=a;i0<b;i0+=block_size){
  2106. Long i1=std::min(b,i0+block_size);
  2107. const Matrix<Real> Min (i1-i0,2*p0, (Iterator<Real>)X.begin()+i0*2*p0, false);
  2108. Matrix<Real> Mout(i1-i0,2*p1, B2.begin(), false);
  2109. Matrix<Real>::GEMM(Mout, Min, Mf);
  2110. for(Long i=i0;i<i1;i++){
  2111. for(Long j=0;j<2*p1;j++){
  2112. B1[j*N*(p0+1)+i]=B2[i-i0][j];
  2113. }
  2114. }
  2115. }
  2116. }
  2117. #pragma omp parallel
  2118. { // Evaluate Legendre polynomial
  2119. Integer tid=omp_get_thread_num();
  2120. Integer omp_p=omp_get_num_threads();
  2121. Long offset0=0;
  2122. Long offset1=0;
  2123. for(Long i=0;i<p1+1;i++){
  2124. Long N0=2*N;
  2125. if(i==0 || i==p1) N0=N;
  2126. Matrix<Real> Min (N0, p0+1 , B1.begin()+offset0, false);
  2127. Matrix<Real> Mout(N0, p1+1-i, B0.begin()+offset1, false);
  2128. { // Mout = Min * Ml[i] // split between threads
  2129. Long a=(tid+0)*N0/omp_p;
  2130. Long b=(tid+1)*N0/omp_p;
  2131. if(a<b){
  2132. Matrix<Real> Min_ (b-a, Min .Dim(1), Min [a], false);
  2133. Matrix<Real> Mout_(b-a, Mout.Dim(1), Mout[a], false);
  2134. Matrix<Real>::GEMM(Mout_,Min_,Ml[i]);
  2135. }
  2136. }
  2137. offset0+=Min .Dim(0)*Min .Dim(1);
  2138. offset1+=Mout.Dim(0)*Mout.Dim(1);
  2139. }
  2140. }
  2141. #pragma omp parallel
  2142. { // S <-- Rearrange(B0)
  2143. Integer tid=omp_get_thread_num();
  2144. Integer omp_p=omp_get_num_threads();
  2145. Long a=(tid+0)*N/omp_p;
  2146. Long b=(tid+1)*N/omp_p;
  2147. for(Long i=a;i<b;i++){
  2148. Long offset=0;
  2149. for(Long j=0;j<2*p1;j++){
  2150. Long len=p1+1-(j+1)/2;
  2151. Real* B_=&B0[i*len+N*offset];
  2152. Real* S_=&S[i*p1*(p1+2)+offset];
  2153. for(Long k=0;k<len;k++) S_[k]=B_[k];
  2154. offset+=len;
  2155. }
  2156. }
  2157. }
  2158. }
  2159. template <class Real> void SphericalHarmonics<Real>::RotateAll(const Vector<Real>& S, Long p0, Long dof, Vector<Real>& S_){
  2160. const std::vector<Matrix<Real>>& Mr=MatRotate(p0);
  2161. std::vector<std::vector<Long>> coeff_perm(p0+1);
  2162. { // Set coeff_perm
  2163. for(Long n=0;n<=p0;n++) coeff_perm[n].resize(std::min(2*n+1,2*p0));
  2164. Long itr=0;
  2165. for(Long i=0;i<2*p0;i++){
  2166. Long m=(i+1)/2;
  2167. for(Long n=m;n<=p0;n++){
  2168. coeff_perm[n][i]=itr;
  2169. itr++;
  2170. }
  2171. }
  2172. }
  2173. Long Ncoef=p0*(p0+2);
  2174. Long N=S.Dim()/Ncoef/dof;
  2175. assert(N*Ncoef*dof==S.Dim());
  2176. if(S_.Dim()!=N*dof*Ncoef*p0*(p0+1)) S_.ReInit(N*dof*Ncoef*p0*(p0+1));
  2177. const Matrix<Real> S0(N*dof, Ncoef, (Iterator<Real>)S.begin(), false);
  2178. Matrix<Real> S1(N*dof*p0*(p0+1), Ncoef, S_.begin(), false);
  2179. #pragma omp parallel
  2180. { // Construct all p0*(p0+1) rotations
  2181. Integer tid=omp_get_thread_num();
  2182. Integer omp_p=omp_get_num_threads();
  2183. Matrix<Real> B0(dof*p0,Ncoef); // memory buffer
  2184. std::vector<Matrix<Real>> Bi(p0+1), Bo(p0+1); // memory buffers
  2185. for(Long i=0;i<=p0;i++){ // initialize Bi, Bo
  2186. Bi[i].ReInit(dof*p0,coeff_perm[i].size());
  2187. Bo[i].ReInit(dof*p0,coeff_perm[i].size());
  2188. }
  2189. Long a=(tid+0)*N/omp_p;
  2190. Long b=(tid+1)*N/omp_p;
  2191. for(Long i=a;i<b;i++){
  2192. for(Long d=0;d<dof;d++){
  2193. for(Long j=0;j<p0;j++){
  2194. Long offset=0;
  2195. for(Long k=0;k<p0+1;k++){
  2196. Real r[2]={cos(k*j*M_PI/p0),-sin(k*j*M_PI/p0)}; // exp(i*k*theta)
  2197. Long len=p0+1-k;
  2198. if(k!=0 && k!=p0){
  2199. for(Long l=0;l<len;l++){
  2200. Real x[2];
  2201. x[0]=S0[i*dof+d][offset+len*0+l];
  2202. x[1]=S0[i*dof+d][offset+len*1+l];
  2203. B0[j*dof+d][offset+len*0+l]=x[0]*r[0]-x[1]*r[1];
  2204. B0[j*dof+d][offset+len*1+l]=x[0]*r[1]+x[1]*r[0];
  2205. }
  2206. offset+=2*len;
  2207. }else{
  2208. for(Long l=0;l<len;l++){
  2209. B0[j*dof+d][offset+l]=S0[i*dof+d][offset+l];
  2210. }
  2211. offset+=len;
  2212. }
  2213. }
  2214. assert(offset==Ncoef);
  2215. }
  2216. }
  2217. { // Fast rotation
  2218. for(Long k=0;k<dof*p0;k++){ // forward permutation
  2219. for(Long l=0;l<=p0;l++){
  2220. for(Long j=0;j<(Long)coeff_perm[l].size();j++){
  2221. Bi[l][k][j]=B0[k][coeff_perm[l][j]];
  2222. }
  2223. }
  2224. }
  2225. for(Long t=0;t<=p0;t++){
  2226. for(Long l=0;l<=p0;l++){ // mat-vec
  2227. Matrix<Real>::GEMM(Bo[l],Bi[l],Mr[t*(p0+1)+l]);
  2228. }
  2229. Matrix<Real> Mout(dof*p0,Ncoef, S1[(i*(p0+1)+t)*dof*p0], false);
  2230. for(Long k=0;k<dof*p0;k++){ // reverse permutation
  2231. for(Long l=0;l<=p0;l++){
  2232. for(Long j=0;j<(Long)coeff_perm[l].size();j++){
  2233. Mout[k][coeff_perm[l][j]]=Bo[l][k][j];
  2234. }
  2235. }
  2236. }
  2237. }
  2238. }
  2239. }
  2240. }
  2241. }
  2242. template <class Real> void SphericalHarmonics<Real>::RotateTranspose(const Vector<Real>& S_, Long p0, Long dof, Vector<Real>& S){
  2243. std::vector<Matrix<Real>> Mr=MatRotate(p0);
  2244. for(Long i=0;i<(Long)Mr.size();i++) Mr[i]=Mr[i].Transpose();
  2245. std::vector<std::vector<Long>> coeff_perm(p0+1);
  2246. { // Set coeff_perm
  2247. for(Long n=0;n<=p0;n++) coeff_perm[n].resize(std::min(2*n+1,2*p0));
  2248. Long itr=0;
  2249. for(Long i=0;i<2*p0;i++){
  2250. Long m=(i+1)/2;
  2251. for(Long n=m;n<=p0;n++){
  2252. coeff_perm[n][i]=itr;
  2253. itr++;
  2254. }
  2255. }
  2256. }
  2257. Long Ncoef=p0*(p0+2);
  2258. Long N=S_.Dim()/Ncoef/dof/(p0*(p0+1));
  2259. assert(N*Ncoef*dof*(p0*(p0+1))==S_.Dim());
  2260. if(S.Dim()!=N*dof*Ncoef*p0*(p0+1)) S.ReInit(N*dof*Ncoef*p0*(p0+1));
  2261. Matrix<Real> S0(N*dof*p0*(p0+1), Ncoef, S.begin(), false);
  2262. const Matrix<Real> S1(N*dof*p0*(p0+1), Ncoef, (Iterator<Real>)S_.begin(), false);
  2263. #pragma omp parallel
  2264. { // Transpose all p0*(p0+1) rotations
  2265. Integer tid=omp_get_thread_num();
  2266. Integer omp_p=omp_get_num_threads();
  2267. Matrix<Real> B0(dof*p0,Ncoef); // memory buffer
  2268. std::vector<Matrix<Real>> Bi(p0+1), Bo(p0+1); // memory buffers
  2269. for(Long i=0;i<=p0;i++){ // initialize Bi, Bo
  2270. Bi[i].ReInit(dof*p0,coeff_perm[i].size());
  2271. Bo[i].ReInit(dof*p0,coeff_perm[i].size());
  2272. }
  2273. Long a=(tid+0)*N/omp_p;
  2274. Long b=(tid+1)*N/omp_p;
  2275. for(Long i=a;i<b;i++){
  2276. for(Long t=0;t<p0+1;t++){
  2277. Long idx0=(i*(p0+1)+t)*p0*dof;
  2278. { // Fast rotation
  2279. const Matrix<Real> Min(p0*dof, Ncoef, (Iterator<Real>)S1[idx0], false);
  2280. for(Long k=0;k<dof*p0;k++){ // forward permutation
  2281. for(Long l=0;l<=p0;l++){
  2282. for(Long j=0;j<(Long)coeff_perm[l].size();j++){
  2283. Bi[l][k][j]=Min[k][coeff_perm[l][j]];
  2284. }
  2285. }
  2286. }
  2287. for(Long l=0;l<=p0;l++){ // mat-vec
  2288. Matrix<Real>::GEMM(Bo[l],Bi[l],Mr[t*(p0+1)+l]);
  2289. }
  2290. for(Long k=0;k<dof*p0;k++){ // reverse permutation
  2291. for(Long l=0;l<=p0;l++){
  2292. for(Long j=0;j<(Long)coeff_perm[l].size();j++){
  2293. B0[k][coeff_perm[l][j]]=Bo[l][k][j];
  2294. }
  2295. }
  2296. }
  2297. }
  2298. for(Long j=0;j<p0;j++){
  2299. for(Long d=0;d<dof;d++){
  2300. Long idx1=idx0+j*dof+d;
  2301. Long offset=0;
  2302. for(Long k=0;k<p0+1;k++){
  2303. Real r[2]={cos(k*j*M_PI/p0),sin(k*j*M_PI/p0)}; // exp(i*k*theta)
  2304. Long len=p0+1-k;
  2305. if(k!=0 && k!=p0){
  2306. for(Long l=0;l<len;l++){
  2307. Real x[2];
  2308. x[0]=B0[j*dof+d][offset+len*0+l];
  2309. x[1]=B0[j*dof+d][offset+len*1+l];
  2310. S0[idx1][offset+len*0+l]=x[0]*r[0]-x[1]*r[1];
  2311. S0[idx1][offset+len*1+l]=x[0]*r[1]+x[1]*r[0];
  2312. }
  2313. offset+=2*len;
  2314. }else{
  2315. for(Long l=0;l<len;l++){
  2316. S0[idx1][offset+l]=B0[j*dof+d][offset+l];
  2317. }
  2318. offset+=len;
  2319. }
  2320. }
  2321. assert(offset==Ncoef);
  2322. }
  2323. }
  2324. }
  2325. }
  2326. }
  2327. }
  2328. template <class Real> void SphericalHarmonics<Real>::StokesSingularInteg(const Vector<Real>& S, Long p0, Long p1, Vector<Real>* SLMatrix, Vector<Real>* DLMatrix){
  2329. Long Ngrid=2*p0*(p0+1);
  2330. Long Ncoef= p0*(p0+2);
  2331. Long Nves=S.Dim()/(Ngrid*COORD_DIM);
  2332. if(SLMatrix) SLMatrix->ReInit(Nves*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM));
  2333. if(DLMatrix) DLMatrix->ReInit(Nves*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM));
  2334. Long BLOCK_SIZE=(Long)6e9/((3*2*p1*(p1+1))*(3*2*p0*(p0+1))*2*8); // Limit memory usage to 6GB
  2335. BLOCK_SIZE=std::min<Long>(BLOCK_SIZE,omp_get_max_threads());
  2336. BLOCK_SIZE=std::max<Long>(BLOCK_SIZE,1);
  2337. for(Long a=0;a<Nves;a+=BLOCK_SIZE){
  2338. Long b=std::min(a+BLOCK_SIZE, Nves);
  2339. Vector<Real> _SLMatrix, _DLMatrix;
  2340. if(SLMatrix) _SLMatrix.ReInit((b-a)*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM), SLMatrix->begin()+a*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM), false);
  2341. if(DLMatrix) _DLMatrix.ReInit((b-a)*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM), DLMatrix->begin()+a*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM), false);
  2342. const Vector<Real> _S ((b-a)*(Ngrid*COORD_DIM) , (Iterator<Real>)S.begin()+a*(Ngrid*COORD_DIM), false);
  2343. if(SLMatrix && DLMatrix) StokesSingularInteg_< true, true>(_S, p0, p1, _SLMatrix, _DLMatrix);
  2344. else if(SLMatrix) StokesSingularInteg_< true, false>(_S, p0, p1, _SLMatrix, _DLMatrix);
  2345. else if(DLMatrix) StokesSingularInteg_<false, true>(_S, p0, p1, _SLMatrix, _DLMatrix);
  2346. }
  2347. }
  2348. template <class Real> template <bool SLayer, bool DLayer> void SphericalHarmonics<Real>::StokesSingularInteg_(const Vector<Real>& X0, Long p0, Long p1, Vector<Real>& SL, Vector<Real>& DL){
  2349. Profile::Tic("Rotate");
  2350. Vector<Real> S0, S;
  2351. SphericalHarmonics<Real>::Grid2SHC(X0, p0+1, 2*p0, p0, S0, SHCArrange::COL_MAJOR_NONZERO);
  2352. SphericalHarmonics<Real>::RotateAll(S0, p0, COORD_DIM, S);
  2353. Profile::Toc();
  2354. Profile::Tic("Upsample");
  2355. Vector<Real> X, X_theta, X_phi, trg;
  2356. SphericalHarmonics<Real>::SHC2Grid(S, SHCArrange::COL_MAJOR_NONZERO, p0, p1+1, 2*p1, &X, &X_theta, &X_phi);
  2357. SphericalHarmonics<Real>::SHC2Pole(S, SHCArrange::COL_MAJOR_NONZERO, p0, trg);
  2358. Profile::Toc();
  2359. Profile::Tic("Stokes");
  2360. Vector<Real> SL0, DL0;
  2361. { // Stokes kernel
  2362. //Long M0=2*p0*(p0+1);
  2363. Long M1=2*p1*(p1+1);
  2364. Long N=trg.Dim()/(2*COORD_DIM);
  2365. assert(X.Dim()==M1*COORD_DIM*N);
  2366. if(SLayer && SL0.Dim()!=N*2*6*M1) SL0.ReInit(2*N*6*M1);
  2367. if(DLayer && DL0.Dim()!=N*2*6*M1) DL0.ReInit(2*N*6*M1);
  2368. const Vector<Real>& qw=SphericalHarmonics<Real>::SingularWeights(p1);
  2369. const Real scal_const_dl = 3.0/(4.0*M_PI);
  2370. const Real scal_const_sl = 1.0/(8.0*M_PI);
  2371. static Real eps=-1;
  2372. if(eps<0){
  2373. eps=1;
  2374. while(eps*(Real)0.5+(Real)1.0>1.0) eps*=0.5;
  2375. }
  2376. #pragma omp parallel
  2377. {
  2378. Integer tid=omp_get_thread_num();
  2379. Integer omp_p=omp_get_num_threads();
  2380. Long a=(tid+0)*N/omp_p;
  2381. Long b=(tid+1)*N/omp_p;
  2382. for(Long i=a;i<b;i++){
  2383. for(Long t=0;t<2;t++){
  2384. Real tx, ty, tz;
  2385. { // Read target coordinates
  2386. tx=trg[i*2*COORD_DIM+0*2+t];
  2387. ty=trg[i*2*COORD_DIM+1*2+t];
  2388. tz=trg[i*2*COORD_DIM+2*2+t];
  2389. }
  2390. for(Long j0=0;j0<p1+1;j0++){
  2391. for(Long j1=0;j1<2*p1;j1++){
  2392. Long s=2*p1*j0+j1;
  2393. Real dx, dy, dz;
  2394. { // Compute dx, dy, dz
  2395. dx=tx-X[(i*COORD_DIM+0)*M1+s];
  2396. dy=ty-X[(i*COORD_DIM+1)*M1+s];
  2397. dz=tz-X[(i*COORD_DIM+2)*M1+s];
  2398. }
  2399. Real nx, ny, nz;
  2400. { // Compute source normal
  2401. Real x_theta=X_phi[(i*COORD_DIM+0)*M1+s];
  2402. Real y_theta=X_phi[(i*COORD_DIM+1)*M1+s];
  2403. Real z_theta=X_phi[(i*COORD_DIM+2)*M1+s];
  2404. Real x_phi=X_theta[(i*COORD_DIM+0)*M1+s];
  2405. Real y_phi=X_theta[(i*COORD_DIM+1)*M1+s];
  2406. Real z_phi=X_theta[(i*COORD_DIM+2)*M1+s];
  2407. nx=(y_theta*z_phi-z_theta*y_phi);
  2408. ny=(z_theta*x_phi-x_theta*z_phi);
  2409. nz=(x_theta*y_phi-y_theta*x_phi);
  2410. }
  2411. Real area_elem=1.0;
  2412. if(SLayer){ // Compute area_elem
  2413. area_elem=sqrt(nx*nx+ny*ny+nz*nz);
  2414. }
  2415. Real rinv, rinv2;
  2416. { // Compute rinv, rinv2
  2417. Real r2=dx*dx+dy*dy+dz*dz;
  2418. rinv=1.0/sqrt(r2);
  2419. if(r2<=eps) rinv=0;
  2420. rinv2=rinv*rinv;
  2421. }
  2422. if(DLayer){
  2423. Real rinv5=rinv2*rinv2*rinv;
  2424. Real r_dot_n_rinv5=scal_const_dl*qw[j0*t+(p1-j0)*(1-t)] * (nx*dx+ny*dy+nz*dz)*rinv5;
  2425. DL0[((i*2+t)*6+0)*M1+s]=dx*dx*r_dot_n_rinv5;
  2426. DL0[((i*2+t)*6+1)*M1+s]=dx*dy*r_dot_n_rinv5;
  2427. DL0[((i*2+t)*6+2)*M1+s]=dx*dz*r_dot_n_rinv5;
  2428. DL0[((i*2+t)*6+3)*M1+s]=dy*dy*r_dot_n_rinv5;
  2429. DL0[((i*2+t)*6+4)*M1+s]=dy*dz*r_dot_n_rinv5;
  2430. DL0[((i*2+t)*6+5)*M1+s]=dz*dz*r_dot_n_rinv5;
  2431. }
  2432. if(SLayer){
  2433. Real area_rinv =scal_const_sl*qw[j0*t+(p1-j0)*(1-t)] * area_elem*rinv;
  2434. Real area_rinv2=area_rinv*rinv2;
  2435. SL0[((i*2+t)*6+0)*M1+s]=area_rinv+dx*dx*area_rinv2;
  2436. SL0[((i*2+t)*6+1)*M1+s]= dx*dy*area_rinv2;
  2437. SL0[((i*2+t)*6+2)*M1+s]= dx*dz*area_rinv2;
  2438. SL0[((i*2+t)*6+3)*M1+s]=area_rinv+dy*dy*area_rinv2;
  2439. SL0[((i*2+t)*6+4)*M1+s]= dy*dz*area_rinv2;
  2440. SL0[((i*2+t)*6+5)*M1+s]=area_rinv+dz*dz*area_rinv2;
  2441. }
  2442. }
  2443. }
  2444. }
  2445. }
  2446. }
  2447. Profile::Add_FLOP(20*(2*p1)*(p1+1)*2*N);
  2448. if(SLayer) Profile::Add_FLOP((19+6)*(2*p1)*(p1+1)*2*N);
  2449. if(DLayer) Profile::Add_FLOP( 22 *(2*p1)*(p1+1)*2*N);
  2450. }
  2451. Profile::Toc();
  2452. Profile::Tic("UpsampleTranspose");
  2453. Vector<Real> SL1, DL1;
  2454. SphericalHarmonics<Real>::SHC2GridTranspose(SL0, p1, p0, SL1);
  2455. SphericalHarmonics<Real>::SHC2GridTranspose(DL0, p1, p0, DL1);
  2456. Profile::Toc();
  2457. Profile::Tic("RotateTranspose");
  2458. Vector<Real> SL2, DL2;
  2459. SphericalHarmonics<Real>::RotateTranspose(SL1, p0, 2*6, SL2);
  2460. SphericalHarmonics<Real>::RotateTranspose(DL1, p0, 2*6, DL2);
  2461. Profile::Toc();
  2462. Profile::Tic("Rearrange");
  2463. Vector<Real> SL3, DL3;
  2464. { // Transpose
  2465. Long Ncoef=p0*(p0+2);
  2466. Long Ngrid=2*p0*(p0+1);
  2467. { // Transpose SL2
  2468. Long N=SL2.Dim()/(6*Ncoef*Ngrid);
  2469. SL3.ReInit(N*COORD_DIM*Ncoef*COORD_DIM*Ngrid);
  2470. #pragma omp parallel
  2471. {
  2472. Integer tid=omp_get_thread_num();
  2473. Integer omp_p=omp_get_num_threads();
  2474. Matrix<Real> B(COORD_DIM*Ncoef,Ngrid*COORD_DIM);
  2475. Long a=(tid+0)*N/omp_p;
  2476. Long b=(tid+1)*N/omp_p;
  2477. for(Long i=a;i<b;i++){
  2478. Matrix<Real> M0(Ngrid*6, Ncoef, SL2.begin()+i*Ngrid*6*Ncoef, false);
  2479. for(Long k=0;k<Ncoef;k++){ // Transpose
  2480. for(Long j=0;j<Ngrid;j++){ // TODO: needs blocking
  2481. B[k+Ncoef*0][j*COORD_DIM+0]=M0[j*6+0][k];
  2482. B[k+Ncoef*1][j*COORD_DIM+0]=M0[j*6+1][k];
  2483. B[k+Ncoef*2][j*COORD_DIM+0]=M0[j*6+2][k];
  2484. B[k+Ncoef*0][j*COORD_DIM+1]=M0[j*6+1][k];
  2485. B[k+Ncoef*1][j*COORD_DIM+1]=M0[j*6+3][k];
  2486. B[k+Ncoef*2][j*COORD_DIM+1]=M0[j*6+4][k];
  2487. B[k+Ncoef*0][j*COORD_DIM+2]=M0[j*6+2][k];
  2488. B[k+Ncoef*1][j*COORD_DIM+2]=M0[j*6+4][k];
  2489. B[k+Ncoef*2][j*COORD_DIM+2]=M0[j*6+5][k];
  2490. }
  2491. }
  2492. Matrix<Real> M1(Ncoef*COORD_DIM, COORD_DIM*Ngrid, SL3.begin()+i*COORD_DIM*Ncoef*COORD_DIM*Ngrid, false);
  2493. for(Long k=0;k<B.Dim(0);k++){ // Rearrange
  2494. for(Long j0=0;j0<COORD_DIM;j0++){
  2495. for(Long j1=0;j1<p0+1;j1++){
  2496. for(Long j2=0;j2<p0;j2++) M1[k][((j0*(p0+1)+ j1)*2+0)*p0+j2]=B[k][((j1*p0+j2)*2+0)*COORD_DIM+j0];
  2497. for(Long j2=0;j2<p0;j2++) M1[k][((j0*(p0+1)+p0-j1)*2+1)*p0+j2]=B[k][((j1*p0+j2)*2+1)*COORD_DIM+j0];
  2498. }
  2499. }
  2500. }
  2501. }
  2502. }
  2503. }
  2504. { // Transpose DL2
  2505. Long N=DL2.Dim()/(6*Ncoef*Ngrid);
  2506. DL3.ReInit(N*COORD_DIM*Ncoef*COORD_DIM*Ngrid);
  2507. #pragma omp parallel
  2508. {
  2509. Integer tid=omp_get_thread_num();
  2510. Integer omp_p=omp_get_num_threads();
  2511. Matrix<Real> B(COORD_DIM*Ncoef,Ngrid*COORD_DIM);
  2512. Long a=(tid+0)*N/omp_p;
  2513. Long b=(tid+1)*N/omp_p;
  2514. for(Long i=a;i<b;i++){
  2515. Matrix<Real> M0(Ngrid*6, Ncoef, DL2.begin()+i*Ngrid*6*Ncoef, false);
  2516. for(Long k=0;k<Ncoef;k++){ // Transpose
  2517. for(Long j=0;j<Ngrid;j++){ // TODO: needs blocking
  2518. B[k+Ncoef*0][j*COORD_DIM+0]=M0[j*6+0][k];
  2519. B[k+Ncoef*1][j*COORD_DIM+0]=M0[j*6+1][k];
  2520. B[k+Ncoef*2][j*COORD_DIM+0]=M0[j*6+2][k];
  2521. B[k+Ncoef*0][j*COORD_DIM+1]=M0[j*6+1][k];
  2522. B[k+Ncoef*1][j*COORD_DIM+1]=M0[j*6+3][k];
  2523. B[k+Ncoef*2][j*COORD_DIM+1]=M0[j*6+4][k];
  2524. B[k+Ncoef*0][j*COORD_DIM+2]=M0[j*6+2][k];
  2525. B[k+Ncoef*1][j*COORD_DIM+2]=M0[j*6+4][k];
  2526. B[k+Ncoef*2][j*COORD_DIM+2]=M0[j*6+5][k];
  2527. }
  2528. }
  2529. Matrix<Real> M1(Ncoef*COORD_DIM, COORD_DIM*Ngrid, DL3.begin()+i*COORD_DIM*Ncoef*COORD_DIM*Ngrid, false);
  2530. for(Long k=0;k<B.Dim(0);k++){ // Rearrange
  2531. for(Long j0=0;j0<COORD_DIM;j0++){
  2532. for(Long j1=0;j1<p0+1;j1++){
  2533. for(Long j2=0;j2<p0;j2++) M1[k][((j0*(p0+1)+ j1)*2+0)*p0+j2]=B[k][((j1*p0+j2)*2+0)*COORD_DIM+j0];
  2534. for(Long j2=0;j2<p0;j2++) M1[k][((j0*(p0+1)+p0-j1)*2+1)*p0+j2]=B[k][((j1*p0+j2)*2+1)*COORD_DIM+j0];
  2535. }
  2536. }
  2537. }
  2538. }
  2539. }
  2540. }
  2541. }
  2542. Profile::Toc();
  2543. Profile::Tic("Grid2SHC");
  2544. SphericalHarmonics<Real>::Grid2SHC(SL3, p0+1, 2*p0, p0, SL, SHCArrange::COL_MAJOR_NONZERO);
  2545. SphericalHarmonics<Real>::Grid2SHC(DL3, p0+1, 2*p0, p0, DL, SHCArrange::COL_MAJOR_NONZERO);
  2546. Profile::Toc();
  2547. }
  2548. } // end namespace