sph_harm.txx 114 KB

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  1. #include SCTL_INCLUDE(legendre_rule.hpp)
  2. // TODO: Replace work vectors with dynamic-arrays
  3. namespace SCTL_NAMESPACE {
  4. template <class Real> void SphericalHarmonics<Real>::Grid2SHC(const Vector<Real>& X, Long Nt, Long Np, Long p1, Vector<Real>& S, SHCArrange arrange){
  5. Long N = X.Dim() / (Np*Nt);
  6. assert(X.Dim() == N*Np*Nt);
  7. Vector<Real> B1(N*(p1+1)*(p1+1));
  8. Grid2SHC_(X, Nt, Np, p1, B1);
  9. SHCArrange0(B1, p1, S, arrange);
  10. }
  11. template <class Real> void SphericalHarmonics<Real>::SHC2Grid(const Vector<Real>& S, SHCArrange arrange, Long p0, Long Nt, Long Np, Vector<Real>* X, Vector<Real>* X_theta, Vector<Real>* X_phi){
  12. Vector<Real> B0;
  13. SHCArrange1(S, arrange, p0, B0);
  14. SHC2Grid_(B0, p0, Nt, Np, X, X_phi, X_theta);
  15. }
  16. template <class Real> void SphericalHarmonics<Real>::SHCEval(const Vector<Real>& S, SHCArrange arrange, Long p0, const Vector<Real>& theta_phi, Vector<Real>& X) {
  17. Long M = (p0+1) * (p0+1);
  18. Long dof;
  19. Matrix<Real> B1;
  20. { // Set B1, dof
  21. Vector<Real> B0;
  22. SHCArrange1(S, arrange, p0, B0);
  23. dof = B0.Dim() / M;
  24. assert(B0.Dim() == dof * M);
  25. B1.ReInit(dof, M);
  26. Vector<Real> B1_(B1.Dim(0) * B1.Dim(1), B1.begin(), false);
  27. SHCArrange0(B0, p0, B1_, SHCArrange::COL_MAJOR_NONZERO);
  28. }
  29. assert(B1.Dim(0) == dof);
  30. assert(B1.Dim(1) == M);
  31. Matrix<Real> SHBasis;
  32. SHBasisEval(p0, theta_phi, SHBasis);
  33. assert(SHBasis.Dim(1) == M);
  34. Long N = SHBasis.Dim(0);
  35. { // Set X
  36. if (X.Dim() != N*dof) X.ReInit(N * dof);
  37. for (Long k0 = 0; k0 < N; k0++) {
  38. for (Long k1 = 0; k1 < dof; k1++) {
  39. Real X_ = 0;
  40. for (Long i = 0; i < M; i++) X_ += B1[k1][i] * SHBasis[k0][i];
  41. X[k0 * dof + k1] = X_;
  42. }
  43. }
  44. }
  45. }
  46. template <class Real> void SphericalHarmonics<Real>::SHC2Pole(const Vector<Real>& S, SHCArrange arrange, Long p0, Vector<Real>& P){
  47. Vector<Real> QP[2];
  48. { // Set QP // TODO: store these weights
  49. Vector<Real> x(1), alp;
  50. const Real SQRT2PI = sqrt<Real>(4 * const_pi<Real>());
  51. for (Long i = 0; i < 2; i++) {
  52. x = (i ? const_pi<Real>() : 0);
  53. LegPoly_(alp, x, p0);
  54. QP[i].ReInit(p0 + 1, alp.begin());
  55. QP[i] *= SQRT2PI;
  56. }
  57. }
  58. Long M, N;
  59. { // Set M, N
  60. M = 0;
  61. if (arrange == SHCArrange::ALL) M = 2*(p0+1)*(p0+1);
  62. if (arrange == SHCArrange::ROW_MAJOR) M = (p0+1)*(p0+2);
  63. if (arrange == SHCArrange::COL_MAJOR_NONZERO) M = (p0+1)*(p0+1);
  64. if (M == 0) return;
  65. N = S.Dim() / M;
  66. assert(S.Dim() == N * M);
  67. }
  68. if(P.Dim() != N * 2) P.ReInit(N * 2);
  69. if (arrange == SHCArrange::ALL) {
  70. #pragma omp parallel
  71. { // Compute pole
  72. Integer tid = omp_get_thread_num();
  73. Integer omp_p = omp_get_num_threads();
  74. Long a = (tid + 0) * N / omp_p;
  75. Long b = (tid + 1) * N / omp_p;
  76. for (Long i = a; i < b; i++) {
  77. Real P_[2] = {0, 0};
  78. for (Long j = 0; j < p0 + 1; j++) {
  79. P_[0] += S[i*M + j*(p0+1)*2] * QP[0][j];
  80. P_[1] += S[i*M + j*(p0+1)*2] * QP[1][j];
  81. }
  82. P[2*i+0] = P_[0];
  83. P[2*i+1] = P_[1];
  84. }
  85. }
  86. }
  87. if (arrange == SHCArrange::ROW_MAJOR) {
  88. #pragma omp parallel
  89. { // Compute pole
  90. Integer tid = omp_get_thread_num();
  91. Integer omp_p = omp_get_num_threads();
  92. Long a = (tid + 0) * N / omp_p;
  93. Long b = (tid + 1) * N / omp_p;
  94. for (Long i = a; i < b; i++) {
  95. Long idx = 0;
  96. Real P_[2] = {0, 0};
  97. for (Long j = 0; j < p0 + 1; j++) {
  98. P_[0] += S[i*M+idx] * QP[0][j];
  99. P_[1] += S[i*M+idx] * QP[1][j];
  100. idx += 2*(j+1);
  101. }
  102. P[2*i+0] = P_[0];
  103. P[2*i+1] = P_[1];
  104. }
  105. }
  106. }
  107. if (arrange == SHCArrange::COL_MAJOR_NONZERO) {
  108. #pragma omp parallel
  109. { // Compute pole
  110. Integer tid = omp_get_thread_num();
  111. Integer omp_p = omp_get_num_threads();
  112. Long a = (tid + 0) * N / omp_p;
  113. Long b = (tid + 1) * N / omp_p;
  114. for (Long i = a; i < b; i++) {
  115. Real P_[2] = {0, 0};
  116. for (Long j = 0; j < p0 + 1; j++) {
  117. P_[0] += S[i*M+j] * QP[0][j];
  118. P_[1] += S[i*M+j] * QP[1][j];
  119. }
  120. P[2*i+0] = P_[0];
  121. P[2*i+1] = P_[1];
  122. }
  123. }
  124. }
  125. }
  126. template <class Real> void SphericalHarmonics<Real>::WriteVTK(const char* fname, const Vector<Real>* S, const Vector<Real>* v_ptr, SHCArrange arrange, Long p0, Long p1, Real period, const Comm& comm){
  127. typedef double VTKReal;
  128. Vector<Real> SS;
  129. if (S == nullptr) {
  130. Integer p = 2;
  131. Integer Ncoeff = (p + 1) * (p + 1);
  132. Vector<Real> SSS(COORD_DIM * Ncoeff), SSS_grid;
  133. SSS.SetZero();
  134. SSS[1+0*p+0*Ncoeff] = sqrt<Real>(2.0)/sqrt<Real>(3.0);
  135. SSS[1+1*p+1*Ncoeff] = 1/sqrt<Real>(3.0);
  136. SSS[1+2*p+2*Ncoeff] = 1/sqrt<Real>(3.0);
  137. SphericalHarmonics<Real>::SHC2Grid(SSS, SHCArrange::COL_MAJOR_NONZERO, p, p+1, 2*p+2, &SSS_grid);
  138. SphericalHarmonics<Real>::Grid2SHC(SSS_grid, p+1, 2*p+2, p0, SS, arrange);
  139. S = &SS;
  140. }
  141. Vector<Real> X, Xp, V, Vp;
  142. { // Upsample X
  143. const Vector<Real>& X0=*S;
  144. SphericalHarmonics<Real>::SHC2Grid(X0, arrange, p0, p1+1, 2*p1, &X);
  145. SphericalHarmonics<Real>::SHC2Pole(X0, arrange, p0, Xp);
  146. }
  147. if(v_ptr){ // Upsample V
  148. const Vector<Real>& X0=*v_ptr;
  149. SphericalHarmonics<Real>::SHC2Grid(X0, arrange, p0, p1+1, 2*p1, &V);
  150. SphericalHarmonics<Real>::SHC2Pole(X0, arrange, p0, Vp);
  151. }
  152. std::vector<VTKReal> point_coord;
  153. std::vector<VTKReal> point_value;
  154. std::vector<int32_t> poly_connect;
  155. std::vector<int32_t> poly_offset;
  156. { // Set point_coord, point_value, poly_connect
  157. Long N_ves = X.Dim()/(2*p1*(p1+1)*COORD_DIM); // Number of vesicles
  158. assert(Xp.Dim() == N_ves*2*COORD_DIM);
  159. for(Long k=0;k<N_ves;k++){ // Set point_coord
  160. Real C[COORD_DIM]={0,0,0};
  161. if(period>0){
  162. for(Integer l=0;l<COORD_DIM;l++) C[l]=0;
  163. for(Long i=0;i<p1+1;i++){
  164. for(Long j=0;j<2*p1;j++){
  165. for(Integer l=0;l<COORD_DIM;l++){
  166. C[l]+=X[j+2*p1*(i+(p1+1)*(l+k*COORD_DIM))];
  167. }
  168. }
  169. }
  170. for(Integer l=0;l<COORD_DIM;l++) C[l]+=Xp[0+2*(l+k*COORD_DIM)];
  171. for(Integer l=0;l<COORD_DIM;l++) C[l]+=Xp[1+2*(l+k*COORD_DIM)];
  172. for(Integer l=0;l<COORD_DIM;l++) C[l]/=2*p1*(p1+1)+2;
  173. for(Integer l=0;l<COORD_DIM;l++) C[l]=(round(C[l]/period))*period;
  174. }
  175. for(Long i=0;i<p1+1;i++){
  176. for(Long j=0;j<2*p1;j++){
  177. for(Integer l=0;l<COORD_DIM;l++){
  178. point_coord.push_back(X[j+2*p1*(i+(p1+1)*(l+k*COORD_DIM))]-C[l]);
  179. }
  180. }
  181. }
  182. for(Integer l=0;l<COORD_DIM;l++) point_coord.push_back(Xp[0+2*(l+k*COORD_DIM)]-C[l]);
  183. for(Integer l=0;l<COORD_DIM;l++) point_coord.push_back(Xp[1+2*(l+k*COORD_DIM)]-C[l]);
  184. }
  185. if(v_ptr) {
  186. Long data__dof = V.Dim() / (2*p1*(p1+1));
  187. for(Long k=0;k<N_ves;k++){ // Set point_value
  188. for(Long i=0;i<p1+1;i++){
  189. for(Long j=0;j<2*p1;j++){
  190. for(Long l=0;l<data__dof;l++){
  191. point_value.push_back(V[j+2*p1*(i+(p1+1)*(l+k*data__dof))]);
  192. }
  193. }
  194. }
  195. for(Long l=0;l<data__dof;l++) point_value.push_back(Vp[0+2*(l+k*data__dof)]);
  196. for(Long l=0;l<data__dof;l++) point_value.push_back(Vp[1+2*(l+k*data__dof)]);
  197. }
  198. }
  199. for(Long k=0;k<N_ves;k++){
  200. for(Long j=0;j<2*p1;j++){
  201. Long i0= 0;
  202. Long i1=p1;
  203. Long j0=((j+0) );
  204. Long j1=((j+1)%(2*p1));
  205. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*(p1+1)+0);
  206. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i0+j0);
  207. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i0+j1);
  208. poly_offset.push_back(poly_connect.size());
  209. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*(p1+1)+1);
  210. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i1+j0);
  211. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i1+j1);
  212. poly_offset.push_back(poly_connect.size());
  213. }
  214. for(Long i=0;i<p1;i++){
  215. for(Long j=0;j<2*p1;j++){
  216. Long i0=((i+0) );
  217. Long i1=((i+1) );
  218. Long j0=((j+0) );
  219. Long j1=((j+1)%(2*p1));
  220. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i0+j0);
  221. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i1+j0);
  222. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i1+j1);
  223. poly_connect.push_back((2*p1*(p1+1)+2)*k + 2*p1*i0+j1);
  224. poly_offset.push_back(poly_connect.size());
  225. }
  226. }
  227. }
  228. }
  229. Integer np = comm.Size();
  230. Integer myrank = comm.Rank();
  231. std::vector<VTKReal>& coord=point_coord;
  232. std::vector<VTKReal>& value=point_value;
  233. std::vector<int32_t>& connect=poly_connect;
  234. std::vector<int32_t>& offset=poly_offset;
  235. Long pt_cnt=coord.size()/COORD_DIM;
  236. Long poly_cnt=poly_offset.size();
  237. // Open file for writing.
  238. std::stringstream vtufname;
  239. vtufname<<fname<<"_"<<std::setfill('0')<<std::setw(6)<<myrank<<".vtp";
  240. std::ofstream vtufile;
  241. vtufile.open(vtufname.str().c_str());
  242. if(vtufile.fail()) return;
  243. bool isLittleEndian;
  244. { // Set isLittleEndian
  245. uint16_t number = 0x1;
  246. uint8_t *numPtr = (uint8_t*)&number;
  247. isLittleEndian=(numPtr[0] == 1);
  248. }
  249. // Proceed to write to file.
  250. Long data_size=0;
  251. vtufile<<"<?xml version=\"1.0\"?>\n";
  252. if(isLittleEndian) vtufile<<"<VTKFile type=\"PolyData\" version=\"0.1\" byte_order=\"LittleEndian\">\n";
  253. else vtufile<<"<VTKFile type=\"PolyData\" version=\"0.1\" byte_order=\"BigEndian\">\n";
  254. //===========================================================================
  255. vtufile<<" <PolyData>\n";
  256. vtufile<<" <Piece NumberOfPoints=\""<<pt_cnt<<"\" NumberOfVerts=\"0\" NumberOfLines=\"0\" NumberOfStrips=\"0\" NumberOfPolys=\""<<poly_cnt<<"\">\n";
  257. //---------------------------------------------------------------------------
  258. vtufile<<" <Points>\n";
  259. vtufile<<" <DataArray type=\"Float"<<sizeof(VTKReal)*8<<"\" NumberOfComponents=\""<<COORD_DIM<<"\" Name=\"Position\" format=\"appended\" offset=\""<<data_size<<"\" />\n";
  260. data_size+=sizeof(uint32_t)+coord.size()*sizeof(VTKReal);
  261. vtufile<<" </Points>\n";
  262. //---------------------------------------------------------------------------
  263. if(value.size()){ // value
  264. vtufile<<" <PointData>\n";
  265. vtufile<<" <DataArray type=\"Float"<<sizeof(VTKReal)*8<<"\" NumberOfComponents=\""<<value.size()/pt_cnt<<"\" Name=\""<<"value"<<"\" format=\"appended\" offset=\""<<data_size<<"\" />\n";
  266. data_size+=sizeof(uint32_t)+value.size()*sizeof(VTKReal);
  267. vtufile<<" </PointData>\n";
  268. }
  269. //---------------------------------------------------------------------------
  270. vtufile<<" <Polys>\n";
  271. vtufile<<" <DataArray type=\"Int32\" Name=\"connectivity\" format=\"appended\" offset=\""<<data_size<<"\" />\n";
  272. data_size+=sizeof(uint32_t)+connect.size()*sizeof(int32_t);
  273. vtufile<<" <DataArray type=\"Int32\" Name=\"offsets\" format=\"appended\" offset=\""<<data_size<<"\" />\n";
  274. data_size+=sizeof(uint32_t)+offset.size() *sizeof(int32_t);
  275. vtufile<<" </Polys>\n";
  276. //---------------------------------------------------------------------------
  277. vtufile<<" </Piece>\n";
  278. vtufile<<" </PolyData>\n";
  279. //===========================================================================
  280. vtufile<<" <AppendedData encoding=\"raw\">\n";
  281. vtufile<<" _";
  282. int32_t block_size;
  283. block_size=coord.size()*sizeof(VTKReal); vtufile.write((char*)&block_size, sizeof(int32_t)); vtufile.write((char*)&coord [0], coord.size()*sizeof(VTKReal));
  284. if(value.size()){ // value
  285. block_size=value.size()*sizeof(VTKReal); vtufile.write((char*)&block_size, sizeof(int32_t)); vtufile.write((char*)&value [0], value.size()*sizeof(VTKReal));
  286. }
  287. block_size=connect.size()*sizeof(int32_t); vtufile.write((char*)&block_size, sizeof(int32_t)); vtufile.write((char*)&connect[0], connect.size()*sizeof(int32_t));
  288. block_size=offset .size()*sizeof(int32_t); vtufile.write((char*)&block_size, sizeof(int32_t)); vtufile.write((char*)&offset [0], offset .size()*sizeof(int32_t));
  289. vtufile<<"\n";
  290. vtufile<<" </AppendedData>\n";
  291. //===========================================================================
  292. vtufile<<"</VTKFile>\n";
  293. vtufile.close();
  294. if(myrank) return;
  295. std::stringstream pvtufname;
  296. pvtufname<<fname<<".pvtp";
  297. std::ofstream pvtufile;
  298. pvtufile.open(pvtufname.str().c_str());
  299. if(pvtufile.fail()) return;
  300. pvtufile<<"<?xml version=\"1.0\"?>\n";
  301. pvtufile<<"<VTKFile type=\"PPolyData\">\n";
  302. pvtufile<<" <PPolyData GhostLevel=\"0\">\n";
  303. pvtufile<<" <PPoints>\n";
  304. pvtufile<<" <PDataArray type=\"Float"<<sizeof(VTKReal)*8<<"\" NumberOfComponents=\""<<COORD_DIM<<"\" Name=\"Position\"/>\n";
  305. pvtufile<<" </PPoints>\n";
  306. if(value.size()){ // value
  307. pvtufile<<" <PPointData>\n";
  308. pvtufile<<" <PDataArray type=\"Float"<<sizeof(VTKReal)*8<<"\" NumberOfComponents=\""<<value.size()/pt_cnt<<"\" Name=\""<<"value"<<"\"/>\n";
  309. pvtufile<<" </PPointData>\n";
  310. }
  311. {
  312. // Extract filename from path.
  313. std::stringstream vtupath;
  314. vtupath<<'/'<<fname;
  315. std::string pathname = vtupath.str();
  316. auto found = pathname.find_last_of("/\\");
  317. std::string fname_ = pathname.substr(found+1);
  318. for(Integer i=0;i<np;i++) pvtufile<<" <Piece Source=\""<<fname_<<"_"<<std::setfill('0')<<std::setw(6)<<i<<".vtp\"/>\n";
  319. }
  320. pvtufile<<" </PPolyData>\n";
  321. pvtufile<<"</VTKFile>\n";
  322. pvtufile.close();
  323. }
  324. template <class Real> void SphericalHarmonics<Real>::Grid2VecSHC(const Vector<Real>& X, Long Nt, Long Np, Long p0, Vector<Real>& S, SHCArrange arrange) {
  325. Long N = X.Dim() / (Np*Nt);
  326. assert(X.Dim() == N*Np*Nt);
  327. assert(N % COORD_DIM == 0);
  328. Vector<Real> B0(N*Nt*Np);
  329. { // Set B0
  330. Vector<Real> sin_phi(Np), cos_phi(Np);
  331. for (Long i = 0; i < Np; i++) {
  332. sin_phi[i] = sin(2 * const_pi<Real>() * i / Np);
  333. cos_phi[i] = cos(2 * const_pi<Real>() * i / Np);
  334. }
  335. const auto& Y = LegendreNodes(Nt - 1);
  336. assert(Y.Dim() == Nt);
  337. Long Ngrid = Nt * Np;
  338. for (Long k = 0; k < N; k+=COORD_DIM) {
  339. for (Long i = 0; i < Nt; i++) {
  340. Real sin_theta = sqrt<Real>(1 - Y[i]*Y[i]);
  341. Real cos_theta = Y[i];
  342. Real csc_theta = 1 / sin_theta;
  343. const auto X_ = X.begin() + (k*Nt+i)*Np;
  344. auto B0_ = B0.begin() + (k*Nt+i)*Np;
  345. for (Long j = 0; j < Np; j++) {
  346. StaticArray<Real,3> in;
  347. in[0] = X_[0*Ngrid+j];
  348. in[1] = X_[1*Ngrid+j];
  349. in[2] = X_[2*Ngrid+j];
  350. StaticArray<Real,9> Q;
  351. { // Set Q
  352. Q[0] = sin_theta*cos_phi[j]; Q[1] = sin_theta*sin_phi[j]; Q[2] = cos_theta;
  353. Q[3] = cos_theta*cos_phi[j]; Q[4] = cos_theta*sin_phi[j]; Q[5] =-sin_theta;
  354. Q[6] = -sin_phi[j]; Q[7] = cos_phi[j]; Q[8] = 0;
  355. }
  356. B0_[0*Ngrid+j] = ( Q[0] * in[0] + Q[1] * in[1] + Q[2] * in[2] );
  357. B0_[1*Ngrid+j] = ( Q[3] * in[0] + Q[4] * in[1] + Q[5] * in[2] ) * csc_theta;
  358. B0_[2*Ngrid+j] = ( Q[6] * in[0] + Q[7] * in[1] + Q[8] * in[2] ) * csc_theta;
  359. }
  360. }
  361. }
  362. }
  363. Long p_ = p0 + 1;
  364. Long M0 = (p0+1)*(p0+1);
  365. Long M_ = (p_+1)*(p_+1);
  366. Vector<Real> B1(N*M_);
  367. Grid2SHC_(B0, Nt, Np, p_, B1);
  368. Vector<Real> B2(N*M0);
  369. const Complex<Real> imag(0,1);
  370. for (Long i=0; i<N; i+=COORD_DIM) {
  371. for (Long m=0; m<=p0; m++) {
  372. for (Long n=m; n<=p0; n++) {
  373. auto read_coeff = [&](const Vector<Real>& coeff, Long i, Long p, Long n, Long m) {
  374. Complex<Real> c;
  375. if (0<=m && m<=n && n<=p) {
  376. Long idx_real = ((2*p-m+3)*m - (m?p+1:0))*N + (p+1-m)*i - m + n;
  377. Long idx_imag = idx_real + (p+1-m)*N;
  378. c.real = coeff[idx_real];
  379. if (m) c.imag = coeff[idx_imag];
  380. }
  381. return c;
  382. };
  383. auto write_coeff = [&](Complex<Real> c, Vector<Real>& coeff, Long i, Long p, Long n, Long m) {
  384. if (0<=m && m<=n && n<=p) {
  385. Long idx_real = ((2*p-m+3)*m - (m?p+1:0))*N + (p+1-m)*i - m + n;
  386. Long idx_imag = idx_real + (p+1-m)*N;
  387. coeff[idx_real] = c.real;
  388. if (m) coeff[idx_imag] = c.imag;
  389. }
  390. };
  391. auto gr = [&](Long n, Long m) { return read_coeff(B1, i+0, p_, n, m); };
  392. auto gt = [&](Long n, Long m) { return read_coeff(B1, i+1, p_, n, m); };
  393. auto gp = [&](Long n, Long m) { return read_coeff(B1, i+2, p_, n, m); };
  394. Complex<Real> phiY, phiG, phiX;
  395. { // (phiG, phiX) <-- (gt, gp)
  396. auto A = [&](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>(n*n * ((n+1)*(n+1) - m*m) / (Real)((2*n+1)*(2*n+3))) : 0); };
  397. auto B = [&](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>((n+1)*(n+1) * (n*n - m*m) / (Real)((2*n+1)*(2*n-1))) : 0); };
  398. phiY = gr(n,m);
  399. phiG = (gt(n+1,m)*A(n,m) - gt(n-1,m)*B(n,m) - imag*m*gp(n,m)) * (1/(Real)(std::max<Long>(n,1)*(n+1)));
  400. phiX = (gp(n+1,m)*A(n,m) - gp(n-1,m)*B(n,m) + imag*m*gt(n,m)) * (1/(Real)(std::max<Long>(n,1)*(n+1)));
  401. }
  402. auto phiV = (phiG * (n + 0) - phiY) * (1/(Real)(2*n + 1));
  403. auto phiW = (phiG * (n + 1) + phiY) * (1/(Real)(2*n + 1));
  404. if (n==0) {
  405. phiW = 0;
  406. phiX = 0;
  407. }
  408. write_coeff(phiV, B2, i+0, p0, n, m);
  409. write_coeff(phiW, B2, i+1, p0, n, m);
  410. write_coeff(phiX, B2, i+2, p0, n, m);
  411. }
  412. }
  413. }
  414. SHCArrange0(B2, p0, S, arrange);
  415. }
  416. template <class Real> void SphericalHarmonics<Real>::VecSHC2Grid(const Vector<Real>& S, SHCArrange arrange, Long p0, Long Nt, Long Np, Vector<Real>& X) {
  417. Vector<Real> B0;
  418. SHCArrange1(S, arrange, p0, B0);
  419. Long p_ = p0 + 1;
  420. Long M0 = (p0+1)*(p0+1);
  421. Long M_ = (p_+1)*(p_+1);
  422. Long N = B0.Dim() / M0;
  423. assert(B0.Dim() == N*M0);
  424. assert(N % COORD_DIM == 0);
  425. Vector<Real> B1(N*M_);
  426. const Complex<Real> imag(0,1);
  427. for (Long i=0; i<N; i+=COORD_DIM) {
  428. for (Long m=0; m<=p_; m++) {
  429. for (Long n=m; n<=p_; n++) {
  430. auto read_coeff = [&](const Vector<Real>& coeff, Long i, Long p, Long n, Long m) {
  431. Complex<Real> c;
  432. if (0<=m && m<=n && n<=p) {
  433. Long idx_real = ((2*p-m+3)*m - (m?p+1:0))*N + (p+1-m)*i - m + n;
  434. Long idx_imag = idx_real + (p+1-m)*N;
  435. c.real = coeff[idx_real];
  436. if (m) c.imag = coeff[idx_imag];
  437. }
  438. return c;
  439. };
  440. auto write_coeff = [&](Complex<Real> c, Vector<Real>& coeff, Long i, Long p, Long n, Long m) {
  441. if (0<=m && m<=n && n<=p) {
  442. Long idx_real = ((2*p-m+3)*m - (m?p+1:0))*N + (p+1-m)*i - m + n;
  443. Long idx_imag = idx_real + (p+1-m)*N;
  444. coeff[idx_real] = c.real;
  445. if (m) coeff[idx_imag] = c.imag;
  446. }
  447. };
  448. auto phiG = [&](Long n, Long m) {
  449. auto phiV = read_coeff(B0, i+0, p0, n, m);
  450. auto phiW = read_coeff(B0, i+1, p0, n, m);
  451. return phiV + phiW;
  452. };
  453. auto phiY = [&](Long n, Long m) {
  454. auto phiV = read_coeff(B0, i+0, p0, n, m);
  455. auto phiW = read_coeff(B0, i+1, p0, n, m);
  456. return phiW * n - phiV * (n + 1);
  457. };
  458. auto phiX = [&](Long n, Long m) {
  459. return read_coeff(B0, i+2, p0, n, m);
  460. };
  461. Complex<Real> gr, gt, gp;
  462. { // (gt, gp) <-- (phiG, phiX)
  463. auto A = [&](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>(n*n * ((n+1)*(n+1) - m*m) / (Real)((2*n+1)*(2*n+3))) : 0); };
  464. auto B = [&](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>((n+1)*(n+1) * (n*n - m*m) / (Real)((2*n+1)*(2*n-1))) : 0); };
  465. gr = phiY(n,m);
  466. gt = phiG(n-1,m)*A(n-1,m) - phiG(n+1,m)*B(n+1,m) - imag*m*phiX(n,m);
  467. gp = phiX(n-1,m)*A(n-1,m) - phiX(n+1,m)*B(n+1,m) + imag*m*phiG(n,m);
  468. }
  469. write_coeff(gr, B1, i+0, p_, n, m);
  470. write_coeff(gt, B1, i+1, p_, n, m);
  471. write_coeff(gp, B1, i+2, p_, n, m);
  472. }
  473. }
  474. }
  475. { // Set X
  476. SHC2Grid_(B1, p_, Nt, Np, &X);
  477. Vector<Real> sin_phi(Np), cos_phi(Np);
  478. for (Long i = 0; i < Np; i++) {
  479. sin_phi[i] = sin(2 * const_pi<Real>() * i / Np);
  480. cos_phi[i] = cos(2 * const_pi<Real>() * i / Np);
  481. }
  482. const auto& Y = LegendreNodes(Nt - 1);
  483. assert(Y.Dim() == Nt);
  484. Long Ngrid = Nt * Np;
  485. for (Long k = 0; k < N; k+=COORD_DIM) {
  486. for (Long i = 0; i < Nt; i++) {
  487. Real sin_theta = sqrt<Real>(1 - Y[i]*Y[i]);
  488. Real cos_theta = Y[i];
  489. Real csc_theta = 1 / sin_theta;
  490. auto X_ = X.begin() + (k*Nt+i)*Np;
  491. for (Long j = 0; j < Np; j++) {
  492. StaticArray<Real,3> in;
  493. in[0] = X_[0*Ngrid+j];
  494. in[1] = X_[1*Ngrid+j] * csc_theta;
  495. in[2] = X_[2*Ngrid+j] * csc_theta;
  496. StaticArray<Real,9> Q;
  497. { // Set Q
  498. Q[0] = sin_theta*cos_phi[j]; Q[1] = sin_theta*sin_phi[j]; Q[2] = cos_theta;
  499. Q[3] = cos_theta*cos_phi[j]; Q[4] = cos_theta*sin_phi[j]; Q[5] =-sin_theta;
  500. Q[6] = -sin_phi[j]; Q[7] = cos_phi[j]; Q[8] = 0;
  501. }
  502. X_[0*Ngrid+j] = ( Q[0] * in[0] + Q[3] * in[1] + Q[6] * in[2] );
  503. X_[1*Ngrid+j] = ( Q[1] * in[0] + Q[4] * in[1] + Q[7] * in[2] );
  504. X_[2*Ngrid+j] = ( Q[2] * in[0] + Q[5] * in[1] + Q[8] * in[2] );
  505. }
  506. }
  507. }
  508. }
  509. }
  510. template <class Real> void SphericalHarmonics<Real>::VecSHCEval(const Vector<Real>& S, SHCArrange arrange, Long p0, const Vector<Real>& theta_phi, Vector<Real>& X) {
  511. Long M = (p0+1) * (p0+1);
  512. Long dof;
  513. Matrix<Real> B1;
  514. { // Set B1, dof
  515. Vector<Real> B0;
  516. SHCArrange1(S, arrange, p0, B0);
  517. dof = B0.Dim() / M / COORD_DIM;
  518. assert(B0.Dim() == dof * COORD_DIM * M);
  519. B1.ReInit(dof, COORD_DIM * M);
  520. Vector<Real> B1_(B1.Dim(0) * B1.Dim(1), B1.begin(), false);
  521. SHCArrange0(B0, p0, B1_, SHCArrange::COL_MAJOR_NONZERO);
  522. }
  523. assert(B1.Dim(1) == COORD_DIM * M);
  524. assert(B1.Dim(0) == dof);
  525. Matrix<Real> SHBasis;
  526. VecSHBasisEval(p0, theta_phi, SHBasis);
  527. assert(SHBasis.Dim(1) == COORD_DIM * M);
  528. Long N = SHBasis.Dim(0) / COORD_DIM;
  529. { // Set X <-- Q * SHBasis * B1
  530. if (X.Dim() != N * dof * COORD_DIM) X.ReInit(N * dof * COORD_DIM);
  531. for (Long k0 = 0; k0 < N; k0++) {
  532. StaticArray<Real,9> Q;
  533. { // Set Q
  534. Real cos_theta = cos(theta_phi[k0 * 2 + 0]);
  535. Real sin_theta = sin(theta_phi[k0 * 2 + 0]);
  536. Real cos_phi = cos(theta_phi[k0 * 2 + 1]);
  537. Real sin_phi = sin(theta_phi[k0 * 2 + 1]);
  538. Q[0] = sin_theta*cos_phi; Q[1] = sin_theta*sin_phi; Q[2] = cos_theta;
  539. Q[3] = cos_theta*cos_phi; Q[4] = cos_theta*sin_phi; Q[5] =-sin_theta;
  540. Q[6] = -sin_phi; Q[7] = cos_phi; Q[8] = 0;
  541. }
  542. for (Long k1 = 0; k1 < dof; k1++) { // Set X <-- Q * SHBasis * B1
  543. StaticArray<Real,COORD_DIM> in;
  544. for (Long j = 0; j < COORD_DIM; j++) {
  545. in[j] = 0;
  546. for (Long i = 0; i < COORD_DIM * M; i++) {
  547. in[j] += B1[k1][i] * SHBasis[k0 * COORD_DIM + j][i];
  548. }
  549. }
  550. X[(k0 * dof + k1) * COORD_DIM + 0] = Q[0] * in[0] + Q[3] * in[1] + Q[6] * in[2];
  551. X[(k0 * dof + k1) * COORD_DIM + 1] = Q[1] * in[0] + Q[4] * in[1] + Q[7] * in[2];
  552. X[(k0 * dof + k1) * COORD_DIM + 2] = Q[2] * in[0] + Q[5] * in[1] + Q[8] * in[2];
  553. }
  554. }
  555. }
  556. }
  557. template <class Real> void SphericalHarmonics<Real>::StokesEvalSL(const Vector<Real>& S, SHCArrange arrange, Long p0, const Vector<Real>& coord, bool interior, Vector<Real>& X) {
  558. Long M = (p0+1) * (p0+1);
  559. Long dof;
  560. Matrix<Real> B1;
  561. { // Set B1, dof
  562. Vector<Real> B0;
  563. SHCArrange1(S, arrange, p0, B0);
  564. dof = B0.Dim() / M / COORD_DIM;
  565. assert(B0.Dim() == dof * COORD_DIM * M);
  566. B1.ReInit(dof, COORD_DIM * M);
  567. Vector<Real> B1_(B1.Dim(0) * B1.Dim(1), B1.begin(), false);
  568. SHCArrange0(B0, p0, B1_, SHCArrange::COL_MAJOR_NONZERO);
  569. }
  570. assert(B1.Dim(1) == COORD_DIM * M);
  571. assert(B1.Dim(0) == dof);
  572. Long N, p_;
  573. Matrix<Real> SHBasis;
  574. Vector<Real> R, theta_phi;
  575. { // Set N, p_, R, SHBasis
  576. p_ = p0 + 1;
  577. Real M_ = (p_+1) * (p_+1);
  578. N = coord.Dim() / COORD_DIM;
  579. assert(coord.Dim() == N * COORD_DIM);
  580. R.ReInit(N);
  581. theta_phi.ReInit(2 * N);
  582. for (Long i = 0; i < N; i++) { // Set R, theta_phi
  583. ConstIterator<Real> x = coord.begin() + i * COORD_DIM;
  584. R[i] = sqrt<Real>(x[0]*x[0] + x[1]*x[1] + x[2]*x[2]);
  585. theta_phi[i * 2 + 0] = atan2(sqrt<Real>(x[0]*x[0] + x[1]*x[1]), x[2]);
  586. theta_phi[i * 2 + 1] = atan2(x[1], x[0]);
  587. }
  588. SHBasisEval(p_, theta_phi, SHBasis);
  589. assert(SHBasis.Dim(1) == M_);
  590. assert(SHBasis.Dim(0) == N);
  591. SCTL_UNUSED(M_);
  592. }
  593. Matrix<Real> StokesOp(N * COORD_DIM, COORD_DIM * M);
  594. for (Long i = 0; i < N; i++) { // Set StokesOp
  595. Real cos_theta, sin_theta, csc_theta, cos_phi, sin_phi;
  596. { // Set cos_theta, csc_theta, cos_phi, sin_phi
  597. cos_theta = cos(theta_phi[i * 2 + 0]);
  598. sin_theta = sin(theta_phi[i * 2 + 0]);
  599. csc_theta = 1 / sin_theta;
  600. cos_phi = cos(theta_phi[i * 2 + 1]);
  601. sin_phi = sin(theta_phi[i * 2 + 1]);
  602. }
  603. Complex<Real> imag(0,1), exp_phi(cos_phi, -sin_phi);
  604. const Real radius = R[i];
  605. Vector<Real> rpow;
  606. rpow.ReInit(p0 + 4);
  607. if (interior) {
  608. rpow[0] = 1 / radius;
  609. for (Long ri = 1; ri < p0 + 4; ri++) rpow[ri] = rpow[ri - 1] * radius; // rpow[n] = r^(n-1)
  610. } else {
  611. rpow[0] = 1;
  612. const Real rinv = 1 / radius;
  613. for (Long ri = 1; ri < p0 + 4; ri++) rpow[ri] = rpow[ri - 1] * rinv; // rpow[n] = r^(-n)
  614. }
  615. for (Long m = 0; m <= p0; m++) {
  616. for (Long n = m; n <= p0; n++) {
  617. auto write_coeff = [&](Complex<Real> c, Long n, Long m, Long k0, Long k1) {
  618. if (0 <= m && m <= n && n <= p0 && 0 <= k0 && k0 < COORD_DIM && 0 <= k1 && k1 < COORD_DIM) {
  619. Long idx = (2 * p0 - m + 2) * m - (m ? p0+1 : 0) + n;
  620. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.real;
  621. if (m) {
  622. idx += (p0+1-m);
  623. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.imag;
  624. }
  625. }
  626. };
  627. Complex<Real> Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp;
  628. { // Set vector spherical harmonics
  629. auto Y = [&SHBasis,p_,i](Long n, Long m) {
  630. Complex<Real> c;
  631. if (0 <= m && m <= n && n <= p_) {
  632. Long idx = (2 * p_ - m + 2) * m - (m ? p_+1 : 0) + n;
  633. c.real = SHBasis[i][idx];
  634. if (m) {
  635. idx += (p_+1-m);
  636. c.imag = SHBasis[i][idx];
  637. }
  638. }
  639. return c;
  640. };
  641. auto Yt = [exp_phi, &Y, &R, i](Long n, Long m) {
  642. auto A = (0<=n && m<=n ? 0.5 * sqrt<Real>((n+m)*(n-m+1)) * (m-1==0?2.0:1.0) : 0);
  643. auto B = (0<=n && m<=n ? 0.5 * sqrt<Real>((n-m)*(n+m+1)) * (m+1==0?2.0:1.0) : 0);
  644. return (B / exp_phi * Y(n, m + 1) - A * exp_phi * Y(n, m - 1)) / R[i];
  645. };
  646. Complex<Real> Y_1 = Y(n + 0, m);
  647. Complex<Real> Y_1t = Yt(n + 0, m);
  648. Complex<Real> Ycsc_1 = Y_1 * csc_theta;
  649. if (fabs(sin_theta) == 0) {
  650. auto Y_csc0 = [exp_phi, cos_theta](Long n, Long m) {
  651. if (m == 1) return -sqrt<Real>((2*n+1)*n*(n+1)) * ((n%2==0) && (cos_theta<0) ? -1 : 1) * exp_phi;
  652. return Complex<Real>(0, 0);
  653. };
  654. Ycsc_1 = Y_csc0(n + 0, m);
  655. }
  656. auto SetVecSH = [&imag,n,m](Complex<Real>& Vr, Complex<Real>& Vt, Complex<Real>& Vp, Complex<Real>& Wr, Complex<Real>& Wt, Complex<Real>& Wp, Complex<Real>& Xr, Complex<Real>& Xt, Complex<Real>& Xp, const Complex<Real> C0, const Complex<Real> C1, const Complex<Real> C2) {
  657. Vr = C0 * (-n-1);
  658. Vt = C2;
  659. Vp = -imag * m * C1;
  660. Wr = C0 * n;
  661. Wt = C2;
  662. Wp = -imag * m * C1;
  663. Xr = 0;
  664. Xt = imag * m * C1;
  665. Xp = C2;
  666. };
  667. { // Set Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp
  668. auto C0 = Y_1;
  669. auto C1 = Ycsc_1;
  670. auto C2 = Y_1t * R[i];
  671. SetVecSH(Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp, C0, C1, C2);
  672. }
  673. }
  674. Complex<Real> SVr, SVt, SVp;
  675. Complex<Real> SWr, SWt, SWp;
  676. Complex<Real> SXr, SXt, SXp;
  677. if (interior) {
  678. Real a, b;
  679. a = n / (Real)((2 * n + 1) * (2 * n + 3)) * rpow[n + 2];
  680. b = -(n + 1) / (Real)(4 * n + 2) * (rpow[n] - rpow[n + 2]);
  681. SVr = a * Vr + b * Wr;
  682. SVt = a * Vt + b * Wt;
  683. SVp = a * Vp + b * Wp;
  684. a = (n + 1) / (Real)((2 * n + 1) * (2 * n - 1)) * rpow[n];
  685. SWr = a * Wr;
  686. SWt = a * Wt;
  687. SWp = a * Wp;
  688. a = 1 / (Real)(2 * n + 1) * rpow[n + 1];
  689. SXr = a * Xr;
  690. SXt = a * Xt;
  691. SXp = a * Xp;
  692. } else {
  693. Real a, b;
  694. a = n / (Real)((2 * n + 1) * (2 * n + 3)) * rpow[n + 2];
  695. SVr = a * Vr;
  696. SVt = a * Vt;
  697. SVp = a * Vp;
  698. a = (n + 1) / (Real)((2 * n + 1) * (2 * n - 1)) * rpow[n];
  699. b = n / (Real)(4 * n + 2) * (rpow[n + 2] - rpow[n]);
  700. SWr = a * Wr + b * Vr;
  701. SWt = a * Wt + b * Vt;
  702. SWp = a * Wp + b * Vp;
  703. a = 1 / (Real)(2 * n + 1) * rpow[n + 1];
  704. SXr = a * Xr;
  705. SXt = a * Xt;
  706. SXp = a * Xp;
  707. }
  708. write_coeff(SVr, n, m, 0, 0);
  709. write_coeff(SVt, n, m, 0, 1);
  710. write_coeff(SVp, n, m, 0, 2);
  711. write_coeff(SWr, n, m, 1, 0);
  712. write_coeff(SWt, n, m, 1, 1);
  713. write_coeff(SWp, n, m, 1, 2);
  714. write_coeff(SXr, n, m, 2, 0);
  715. write_coeff(SXt, n, m, 2, 1);
  716. write_coeff(SXp, n, m, 2, 2);
  717. }
  718. }
  719. }
  720. { // Set X <-- Q * StokesOp * B1
  721. if (X.Dim() != N * dof * COORD_DIM) X.ReInit(N * dof * COORD_DIM);
  722. for (Long k0 = 0; k0 < N; k0++) {
  723. StaticArray<Real,9> Q;
  724. { // Set Q
  725. Real cos_theta = cos(theta_phi[k0 * 2 + 0]);
  726. Real sin_theta = sin(theta_phi[k0 * 2 + 0]);
  727. Real cos_phi = cos(theta_phi[k0 * 2 + 1]);
  728. Real sin_phi = sin(theta_phi[k0 * 2 + 1]);
  729. Q[0] = sin_theta*cos_phi; Q[1] = sin_theta*sin_phi; Q[2] = cos_theta;
  730. Q[3] = cos_theta*cos_phi; Q[4] = cos_theta*sin_phi; Q[5] =-sin_theta;
  731. Q[6] = -sin_phi; Q[7] = cos_phi; Q[8] = 0;
  732. }
  733. for (Long k1 = 0; k1 < dof; k1++) { // Set X <-- Q * StokesOp * B1
  734. StaticArray<Real,COORD_DIM> in;
  735. for (Long j = 0; j < COORD_DIM; j++) {
  736. in[j] = 0;
  737. for (Long i = 0; i < COORD_DIM * M; i++) {
  738. in[j] += B1[k1][i] * StokesOp[k0 * COORD_DIM + j][i];
  739. }
  740. }
  741. X[(k0 * dof + k1) * COORD_DIM + 0] = Q[0] * in[0] + Q[3] * in[1] + Q[6] * in[2];
  742. X[(k0 * dof + k1) * COORD_DIM + 1] = Q[1] * in[0] + Q[4] * in[1] + Q[7] * in[2];
  743. X[(k0 * dof + k1) * COORD_DIM + 2] = Q[2] * in[0] + Q[5] * in[1] + Q[8] * in[2];
  744. }
  745. }
  746. }
  747. }
  748. template <class Real> void SphericalHarmonics<Real>::StokesEvalDL(const Vector<Real>& S, SHCArrange arrange, Long p0, const Vector<Real>& coord, bool interior, Vector<Real>& X) {
  749. Long M = (p0+1) * (p0+1);
  750. Long dof;
  751. Matrix<Real> B1;
  752. { // Set B1, dof
  753. Vector<Real> B0;
  754. SHCArrange1(S, arrange, p0, B0);
  755. dof = B0.Dim() / M / COORD_DIM;
  756. assert(B0.Dim() == dof * COORD_DIM * M);
  757. B1.ReInit(dof, COORD_DIM * M);
  758. Vector<Real> B1_(B1.Dim(0) * B1.Dim(1), B1.begin(), false);
  759. SHCArrange0(B0, p0, B1_, SHCArrange::COL_MAJOR_NONZERO);
  760. }
  761. assert(B1.Dim(1) == COORD_DIM * M);
  762. assert(B1.Dim(0) == dof);
  763. Long N, p_;
  764. Matrix<Real> SHBasis;
  765. Vector<Real> R, theta_phi;
  766. { // Set N, p_, R, SHBasis
  767. p_ = p0 + 1;
  768. Real M_ = (p_+1) * (p_+1);
  769. N = coord.Dim() / COORD_DIM;
  770. assert(coord.Dim() == N * COORD_DIM);
  771. R.ReInit(N);
  772. theta_phi.ReInit(2 * N);
  773. for (Long i = 0; i < N; i++) { // Set R, theta_phi
  774. ConstIterator<Real> x = coord.begin() + i * COORD_DIM;
  775. R[i] = sqrt<Real>(x[0]*x[0] + x[1]*x[1] + x[2]*x[2]);
  776. theta_phi[i * 2 + 0] = atan2(sqrt<Real>(x[0]*x[0] + x[1]*x[1]), x[2]);
  777. theta_phi[i * 2 + 1] = atan2(x[1], x[0]);
  778. }
  779. SHBasisEval(p_, theta_phi, SHBasis);
  780. assert(SHBasis.Dim(1) == M_);
  781. assert(SHBasis.Dim(0) == N);
  782. SCTL_UNUSED(M_);
  783. }
  784. Matrix<Real> StokesOp(N * COORD_DIM, COORD_DIM * M);
  785. for (Long i = 0; i < N; i++) { // Set StokesOp
  786. Real cos_theta, sin_theta, csc_theta, cos_phi, sin_phi;
  787. { // Set cos_theta, csc_theta, cos_phi, sin_phi
  788. cos_theta = cos(theta_phi[i * 2 + 0]);
  789. sin_theta = sin(theta_phi[i * 2 + 0]);
  790. csc_theta = 1 / sin_theta;
  791. cos_phi = cos(theta_phi[i * 2 + 1]);
  792. sin_phi = sin(theta_phi[i * 2 + 1]);
  793. }
  794. Complex<Real> imag(0,1), exp_phi(cos_phi, -sin_phi);
  795. const Real radius = R[i];
  796. Vector<Real> rpow;
  797. rpow.ReInit(p0 + 4);
  798. if (interior) {
  799. rpow[0] = 1 / radius;
  800. for (Long ri = 1; ri < p0 + 4; ri++) rpow[ri] = rpow[ri - 1] * radius; // rpow[n] = r^(n-1)
  801. } else {
  802. rpow[0] = 1;
  803. const Real rinv = 1 / radius;
  804. for (Long ri = 1; ri < p0 + 4; ri++) rpow[ri] = rpow[ri - 1] * rinv; // rpow[n] = r^(-n)
  805. }
  806. for (Long m = 0; m <= p0; m++) {
  807. for (Long n = m; n <= p0; n++) {
  808. auto write_coeff = [&](Complex<Real> c, Long n, Long m, Long k0, Long k1) {
  809. if (0 <= m && m <= n && n <= p0 && 0 <= k0 && k0 < COORD_DIM && 0 <= k1 && k1 < COORD_DIM) {
  810. Long idx = (2 * p0 - m + 2) * m - (m ? p0+1 : 0) + n;
  811. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.real;
  812. if (m) {
  813. idx += (p0+1-m);
  814. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.imag;
  815. }
  816. }
  817. };
  818. Complex<Real> Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp;
  819. { // Set vector spherical harmonics
  820. auto Y = [&SHBasis,p_,i](Long n, Long m) {
  821. Complex<Real> c;
  822. if (0 <= m && m <= n && n <= p_) {
  823. Long idx = (2 * p_ - m + 2) * m - (m ? p_+1 : 0) + n;
  824. c.real = SHBasis[i][idx];
  825. if (m) {
  826. idx += (p_+1-m);
  827. c.imag = SHBasis[i][idx];
  828. }
  829. }
  830. return c;
  831. };
  832. auto Yt = [exp_phi, &Y, &R, i](Long n, Long m) {
  833. auto A = (0<=n && m<=n ? 0.5 * sqrt<Real>((n+m)*(n-m+1)) * (m-1==0?2.0:1.0) : 0);
  834. auto B = (0<=n && m<=n ? 0.5 * sqrt<Real>((n-m)*(n+m+1)) * (m+1==0?2.0:1.0) : 0);
  835. return (B / exp_phi * Y(n, m + 1) - A * exp_phi * Y(n, m - 1)) / R[i];
  836. };
  837. Complex<Real> Y_1 = Y(n + 0, m);
  838. Complex<Real> Y_1t = Yt(n + 0, m);
  839. Complex<Real> Ycsc_1 = Y_1 * csc_theta;
  840. if (fabs(sin_theta) == 0) {
  841. auto Y_csc0 = [exp_phi, cos_theta](Long n, Long m) {
  842. if (m == 1) return -sqrt<Real>((2*n+1)*n*(n+1)) * ((n%2==0) && (cos_theta<0) ? -1 : 1) * exp_phi;
  843. return Complex<Real>(0, 0);
  844. };
  845. Ycsc_1 = Y_csc0(n + 0, m);
  846. }
  847. auto SetVecSH = [&imag,n,m](Complex<Real>& Vr, Complex<Real>& Vt, Complex<Real>& Vp, Complex<Real>& Wr, Complex<Real>& Wt, Complex<Real>& Wp, Complex<Real>& Xr, Complex<Real>& Xt, Complex<Real>& Xp, const Complex<Real> C0, const Complex<Real> C1, const Complex<Real> C2) {
  848. Vr = C0 * (-n-1);
  849. Vt = C2;
  850. Vp = -imag * m * C1;
  851. Wr = C0 * n;
  852. Wt = C2;
  853. Wp = -imag * m * C1;
  854. Xr = 0;
  855. Xt = imag * m * C1;
  856. Xp = C2;
  857. };
  858. { // Set Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp
  859. auto C0 = Y_1;
  860. auto C1 = Ycsc_1;
  861. auto C2 = Y_1t * R[i];
  862. SetVecSH(Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp, C0, C1, C2);
  863. }
  864. }
  865. Complex<Real> SVr, SVt, SVp;
  866. Complex<Real> SWr, SWt, SWp;
  867. Complex<Real> SXr, SXt, SXp;
  868. if (interior) {
  869. Real a, b;
  870. a = -2 * n * (n + 2) / (Real)((2 * n + 1) * (2 * n + 3)) * rpow[n + 2]; // pow<Real>(R[i], n+1);
  871. b = -(n + 1) * (n + 2) / (Real)(2 * n + 1) * (rpow[n + 2] - rpow[n]); //(pow<Real>(R[i], n+1) - pow<Real>(R[i], n-1));
  872. SVr = a * Vr + b * Wr;
  873. SVt = a * Vt + b * Wt;
  874. SVp = a * Vp + b * Wp;
  875. a = -(2 * n * n + 1) / (Real)((2 * n + 1) * (2 * n - 1)) * rpow[n]; // pow<Real>(R[i], n-1);
  876. SWr = a * Wr;
  877. SWt = a * Wt;
  878. SWp = a * Wp;
  879. a = -(n + 2) / (Real)(2 * n + 1) * rpow[n + 1]; // pow<Real>(R[i], n);
  880. SXr = a * Xr;
  881. SXt = a * Xt;
  882. SXp = a * Xp;
  883. } else {
  884. Real a, b;
  885. a = (2 * n * n + 4 * n + 3) / (Real)((2 * n + 1) * (2 * n + 3)) * rpow[n + 2]; // pow<Real>(R[i], -n-2);
  886. SVr = a * Vr;
  887. SVt = a * Vt;
  888. SVp = a * Vp;
  889. a = 2 * (n + 1) * (n - 1) / (Real)((2 * n + 1) * (2 * n - 1)) * rpow[n]; // pow<Real>(R[i], -n);
  890. b = 2 * n * (n - 1) / (Real)(4 * n + 2) * (rpow[n + 2] - rpow[n]); // (pow<Real>(R[i], -n-2) - pow<Real>(R[i], -n));
  891. SWr = a * Wr + b * Vr;
  892. SWt = a * Wt + b * Vt;
  893. SWp = a * Wp + b * Vp;
  894. a = (n - 1) / (Real)(2 * n + 1) * rpow[n + 1]; // pow<Real>(R[i], -n-1);
  895. SXr = a * Xr;
  896. SXt = a * Xt;
  897. SXp = a * Xp;
  898. }
  899. write_coeff(SVr, n, m, 0, 0);
  900. write_coeff(SVt, n, m, 0, 1);
  901. write_coeff(SVp, n, m, 0, 2);
  902. write_coeff(SWr, n, m, 1, 0);
  903. write_coeff(SWt, n, m, 1, 1);
  904. write_coeff(SWp, n, m, 1, 2);
  905. write_coeff(SXr, n, m, 2, 0);
  906. write_coeff(SXt, n, m, 2, 1);
  907. write_coeff(SXp, n, m, 2, 2);
  908. }
  909. }
  910. }
  911. { // Set X <-- Q * StokesOp * B1
  912. if (X.Dim() != N * dof * COORD_DIM) X.ReInit(N * dof * COORD_DIM);
  913. for (Long k0 = 0; k0 < N; k0++) {
  914. StaticArray<Real,9> Q;
  915. { // Set Q
  916. Real cos_theta = cos(theta_phi[k0 * 2 + 0]);
  917. Real sin_theta = sin(theta_phi[k0 * 2 + 0]);
  918. Real cos_phi = cos(theta_phi[k0 * 2 + 1]);
  919. Real sin_phi = sin(theta_phi[k0 * 2 + 1]);
  920. Q[0] = sin_theta*cos_phi; Q[1] = sin_theta*sin_phi; Q[2] = cos_theta;
  921. Q[3] = cos_theta*cos_phi; Q[4] = cos_theta*sin_phi; Q[5] =-sin_theta;
  922. Q[6] = -sin_phi; Q[7] = cos_phi; Q[8] = 0;
  923. }
  924. for (Long k1 = 0; k1 < dof; k1++) { // Set X <-- Q * StokesOp * B1
  925. StaticArray<Real,COORD_DIM> in;
  926. for (Long j = 0; j < COORD_DIM; j++) {
  927. in[j] = 0;
  928. for (Long i = 0; i < COORD_DIM * M; i++) {
  929. in[j] += B1[k1][i] * StokesOp[k0 * COORD_DIM + j][i];
  930. }
  931. }
  932. X[(k0 * dof + k1) * COORD_DIM + 0] = Q[0] * in[0] + Q[3] * in[1] + Q[6] * in[2];
  933. X[(k0 * dof + k1) * COORD_DIM + 1] = Q[1] * in[0] + Q[4] * in[1] + Q[7] * in[2];
  934. X[(k0 * dof + k1) * COORD_DIM + 2] = Q[2] * in[0] + Q[5] * in[1] + Q[8] * in[2];
  935. }
  936. }
  937. }
  938. }
  939. template <class Real> void SphericalHarmonics<Real>::StokesEvalKL(const Vector<Real>& S, SHCArrange arrange, Long p0, const Vector<Real>& coord, const Vector<Real>& norm, bool interior, Vector<Real>& X) {
  940. Long M = (p0+1) * (p0+1);
  941. Long dof;
  942. Matrix<Real> B1;
  943. { // Set B1, dof
  944. Vector<Real> B0;
  945. SHCArrange1(S, arrange, p0, B0);
  946. dof = B0.Dim() / M / COORD_DIM;
  947. assert(B0.Dim() == dof * COORD_DIM * M);
  948. B1.ReInit(dof, COORD_DIM * M);
  949. Vector<Real> B1_(B1.Dim(0) * B1.Dim(1), B1.begin(), false);
  950. SHCArrange0(B0, p0, B1_, SHCArrange::COL_MAJOR_NONZERO);
  951. }
  952. assert(B1.Dim(1) == COORD_DIM * M);
  953. assert(B1.Dim(0) == dof);
  954. Long N, p_;
  955. Matrix<Real> SHBasis;
  956. Vector<Real> R, theta_phi;
  957. { // Set N, p_, R, SHBasis
  958. p_ = p0 + 2;
  959. Real M_ = (p_+1) * (p_+1);
  960. N = coord.Dim() / COORD_DIM;
  961. assert(coord.Dim() == N * COORD_DIM);
  962. R.ReInit(N);
  963. theta_phi.ReInit(2 * N);
  964. for (Long i = 0; i < N; i++) { // Set R, theta_phi
  965. ConstIterator<Real> x = coord.begin() + i * COORD_DIM;
  966. R[i] = sqrt<Real>(x[0]*x[0] + x[1]*x[1] + x[2]*x[2]);
  967. theta_phi[i * 2 + 0] = atan2(sqrt<Real>(x[0]*x[0] + x[1]*x[1]) + 1e-50, x[2]);
  968. theta_phi[i * 2 + 1] = atan2(x[1], x[0]);
  969. }
  970. SHBasisEval(p_, theta_phi, SHBasis);
  971. assert(SHBasis.Dim(1) == M_);
  972. assert(SHBasis.Dim(0) == N);
  973. SCTL_UNUSED(M_);
  974. }
  975. Matrix<Real> StokesOp(N * COORD_DIM, COORD_DIM * M);
  976. for (Long i = 0; i < N; i++) { // Set StokesOp
  977. Real cos_theta, sin_theta, csc_theta, cot_theta, cos_phi, sin_phi;
  978. { // Set cos_theta, sin_theta, cos_phi, sin_phi
  979. cos_theta = cos(theta_phi[i * 2 + 0]);
  980. sin_theta = sin(theta_phi[i * 2 + 0]);
  981. csc_theta = 1 / sin_theta;
  982. cot_theta = cos_theta * csc_theta;
  983. cos_phi = cos(theta_phi[i * 2 + 1]);
  984. sin_phi = sin(theta_phi[i * 2 + 1]);
  985. }
  986. Complex<Real> imag(0,1), exp_phi(cos_phi, -sin_phi);
  987. const Real radius = R[i];
  988. Vector<Real> rpow;
  989. rpow.ReInit(p0 + 4);
  990. if (interior) {
  991. rpow[0] = 1 / (radius * radius);
  992. for (Long ri = 1; ri < p0 + 4; ri++) rpow[ri] = rpow[ri - 1] * radius; // rpow[n] = r^(n-2)
  993. } else {
  994. rpow[0] = 1;
  995. const Real rinv = 1 / radius;
  996. for (Long ri = 1; ri < p0 + 4; ri++) rpow[ri] = rpow[ri - 1] * rinv; // rpow[n] = r^(-n)
  997. }
  998. StaticArray<Real, COORD_DIM> norm0;
  999. { // Set norm0 <-- Q^t * norm
  1000. StaticArray<Real,9> Q;
  1001. { // Set Q
  1002. Q[0] = sin_theta*cos_phi; Q[1] = sin_theta*sin_phi; Q[2] = cos_theta;
  1003. Q[3] = cos_theta*cos_phi; Q[4] = cos_theta*sin_phi; Q[5] =-sin_theta;
  1004. Q[6] = -sin_phi; Q[7] = cos_phi; Q[8] = 0;
  1005. }
  1006. StaticArray<Real,COORD_DIM> in;
  1007. in[0] = norm[i * COORD_DIM + 0];
  1008. in[1] = norm[i * COORD_DIM + 1];
  1009. in[2] = norm[i * COORD_DIM + 2];
  1010. norm0[0] = Q[0] * in[0] + Q[1] * in[1] + Q[2] * in[2];
  1011. norm0[1] = Q[3] * in[0] + Q[4] * in[1] + Q[5] * in[2];
  1012. norm0[2] = Q[6] * in[0] + Q[7] * in[1] + Q[8] * in[2];
  1013. }
  1014. for (Long m = 0; m <= p0; m++) {
  1015. for (Long n = m; n <= p0; n++) {
  1016. auto write_coeff = [&](Complex<Real> c, Long n, Long m, Long k0, Long k1) {
  1017. if (0 <= m && m <= n && n <= p0 && 0 <= k0 && k0 < COORD_DIM && 0 <= k1 && k1 < COORD_DIM) {
  1018. Long idx = (2 * p0 - m + 2) * m - (m ? p0+1 : 0) + n;
  1019. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.real;
  1020. if (m) {
  1021. idx += (p0+1-m);
  1022. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.imag;
  1023. }
  1024. }
  1025. };
  1026. Complex<Real> Ynm;
  1027. Complex<Real> Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp;
  1028. Complex<Real> Vr_t, Vt_t, Vp_t, Wr_t, Wt_t, Wp_t, Xr_t, Xt_t, Xp_t;
  1029. Complex<Real> Vr_p, Vt_p, Vp_p, Wr_p, Wt_p, Wp_p, Xr_p, Xt_p, Xp_p;
  1030. { // Set vector spherical harmonics
  1031. auto Y = [&SHBasis,p_,i](Long n, Long m) {
  1032. Complex<Real> c;
  1033. if (0 <= m && m <= n && n <= p_) {
  1034. Long idx = (2 * p_ - m + 2) * m - (m ? p_+1 : 0) + n;
  1035. c.real = SHBasis[i][idx];
  1036. if (m) {
  1037. idx += (p_+1-m);
  1038. c.imag = SHBasis[i][idx];
  1039. }
  1040. }
  1041. return c;
  1042. };
  1043. auto Yt = [exp_phi, &Y, &R, i](Long n, Long m) {
  1044. auto A = (0<=n && m<=n ? 0.5 * sqrt<Real>((n+m)*(n-m+1)) * (m-1==0?2.0:1.0) : 0);
  1045. auto B = (0<=n && m<=n ? 0.5 * sqrt<Real>((n-m)*(n+m+1)) * (m+1==0?2.0:1.0) : 0);
  1046. return (B / exp_phi * Y(n, m + 1) - A * exp_phi * Y(n, m - 1)) / R[i];
  1047. };
  1048. auto Yp = [&Y, &imag, &R, i, csc_theta](Long n, Long m) {
  1049. return imag * m * Y(n, m) * csc_theta / R[i];
  1050. };
  1051. auto Ypt = [&Yt, &imag](Long n, Long m) {
  1052. return imag * m * Yt(n, m);
  1053. };
  1054. auto Ytt = [sin_theta, exp_phi, &Yt, &R, i](Long n, Long m) {
  1055. auto A = (0<=n && m<=n ? 0.5 * sqrt<Real>((n+m)*(n-m+1)) * (m-1==0?2.0:1.0) : 0);
  1056. auto B = (0<=n && m<=n ? 0.5 * sqrt<Real>((n-m)*(n+m+1)) * (m+1==0?2.0:1.0) : 0);
  1057. return (n==0 ? 0 : (B / exp_phi * Yt(n, m + 1) - A * exp_phi * Yt(n, m - 1)));
  1058. };
  1059. Complex<Real> Y_1 = Y(n + 0, m);
  1060. Complex<Real> Y_0t = Yt(n - 1, m);
  1061. Complex<Real> Y_1t = Yt(n + 0, m);
  1062. Complex<Real> Y_2t = Yt(n + 1, m);
  1063. //Complex<Real> Y_0p = Yp(n - 1, m);
  1064. Complex<Real> Y_1p = Yp(n + 0, m);
  1065. //Complex<Real> Y_2p = Yp(n + 1, m);
  1066. auto Anm = (0<=n && m<=n && n<=p_ ? sqrt<Real>(n*n * ((n+1)*(n+1) - m*m) / (Real)((2*n+1)*(2*n+3))) : 0);
  1067. auto Bnm = (0<=n && m<=n && n<=p_ ? sqrt<Real>((n+1)*(n+1) * (n*n - m*m) / (Real)((2*n+1)*(2*n-1))) : 0);
  1068. auto SetVecSH = [&imag,n,m](Complex<Real>& Vr, Complex<Real>& Vt, Complex<Real>& Vp, Complex<Real>& Wr, Complex<Real>& Wt, Complex<Real>& Wp, Complex<Real>& Xr, Complex<Real>& Xt, Complex<Real>& Xp, const Complex<Real> C0, const Complex<Real> C1, const Complex<Real> C2) {
  1069. Vr = C0 * (-n-1);
  1070. Vt = C2;
  1071. Vp = -imag * m * C1;
  1072. Wr = C0 * n;
  1073. Wt = C2;
  1074. Wp = -imag * m * C1;
  1075. Xr = 0;
  1076. Xt = imag * m * C1;
  1077. Xp = C2;
  1078. };
  1079. { // Set Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp
  1080. auto C0 = Y_1;
  1081. auto C1 = Y_1 * csc_theta;
  1082. auto C2 = Yt(n,m) * R[i];
  1083. SetVecSH(Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp, C0, C1, C2);
  1084. }
  1085. { // Set Vr_t, Vt_t, Vp_t, Wr_t, Wt_t, Wp_t, Xr_t, Xt_t, Xp_t
  1086. auto C0 = Y_1t;
  1087. auto C1 = (Y_1t - Y_1 * cot_theta / R[i]) * csc_theta;
  1088. if (fabs(cos_theta) == 1 && m == 1) C1 = 0; ///////////// TODO
  1089. auto C2 = Ytt(n,m);
  1090. if (!m) C2 = (Anm * Y_2t - Bnm * Y_0t) * csc_theta - Y_1t * cot_theta; ///////////// TODO
  1091. SetVecSH(Vr_t, Vt_t, Vp_t, Wr_t, Wt_t, Wp_t, Xr_t, Xt_t, Xp_t, C0, C1, C2);
  1092. Vr_t += (-Vt) / R[i];
  1093. Vt_t += ( Vr) / R[i];
  1094. Wr_t += (-Wt) / R[i];
  1095. Wt_t += ( Wr) / R[i];
  1096. Xr_t += (-Xt) / R[i];
  1097. Xt_t += ( Xr) / R[i];
  1098. }
  1099. { // Set Vr_p, Vt_p, Vp_p, Wr_p, Wt_p, Wp_p, Xr_p, Xt_p, Xp_p
  1100. auto C0 = -Y_1p;
  1101. auto C1 = -Y_1p * csc_theta;
  1102. auto C2 = -Ypt(n, m) * csc_theta;
  1103. //auto C2 = -(Anm * Y_2p - Bnm * Y_0p) * csc_theta;
  1104. SetVecSH(Vr_p, Vt_p, Vp_p, Wr_p, Wt_p, Wp_p, Xr_p, Xt_p, Xp_p, C0, C1, C2);
  1105. Vr_p += (-sin_theta * Vp ) * csc_theta / R[i];
  1106. Vt_p += (-cos_theta * Vp ) * csc_theta / R[i];
  1107. Vp_p += ( sin_theta * Vr + cos_theta * Vt) * csc_theta / R[i];
  1108. Wr_p += (-sin_theta * Wp ) * csc_theta / R[i];
  1109. Wt_p += (-cos_theta * Wp ) * csc_theta / R[i];
  1110. Wp_p += ( sin_theta * Wr + cos_theta * Wt) * csc_theta / R[i];
  1111. Xr_p += (-sin_theta * Xp ) * csc_theta / R[i];
  1112. Xt_p += (-cos_theta * Xp ) * csc_theta / R[i];
  1113. Xp_p += ( sin_theta * Xr + cos_theta * Xt) * csc_theta / R[i];
  1114. if (fabs(cos_theta) == 1 && m == 1) {
  1115. Vt_p = 0;
  1116. Vp_p = 0;
  1117. Wt_p = 0;
  1118. Wp_p = 0;
  1119. Xt_p = 0;
  1120. Xp_p = 0;
  1121. }
  1122. }
  1123. Ynm = Y_1;
  1124. }
  1125. if (fabs(cos_theta) == 1) {
  1126. if (m!=0) Vr = 0;
  1127. if (m!=1) Vt = 0;
  1128. if (m!=1) Vp = 0;
  1129. if (m!=0) Wr = 0;
  1130. if (m!=1) Wt = 0;
  1131. if (m!=1) Wp = 0;
  1132. Xr = 0;
  1133. if (m!=1) Xt = 0;
  1134. if (m!=1) Xp = 0;
  1135. if (m!=1 ) Vr_t = 0;
  1136. if (m!=0 && m!=2) Vt_t = 0;
  1137. if (m!=2 ) Vp_t = 0;
  1138. if (m!=1 ) Wr_t = 0;
  1139. if (m!=0 && m!=2) Wt_t = 0;
  1140. if (m!=2 ) Wp_t = 0;
  1141. if (m!=1 ) Xr_t = 0;
  1142. if (m!=2 ) Xt_t = 0;
  1143. if (m!=0 && m!=2) Xp_t = 0;
  1144. if (m!=1 ) Vr_p = 0;
  1145. if (m!=2 ) Vt_p = 0;
  1146. if (m!=0 && m!=2) Vp_p = 0;
  1147. if (m!=1 ) Wr_p = 0;
  1148. if (m!=2 ) Wt_p = 0;
  1149. if (m!=0 && m!=2) Wp_p = 0;
  1150. if (m!=1 ) Xr_p = 0;
  1151. if (m!=0 && m!=2) Xt_p = 0;
  1152. if (m!=2 ) Xp_p = 0;
  1153. }
  1154. Complex<Real> PV, PW, PX;
  1155. Complex<Real> SV[COORD_DIM][COORD_DIM];
  1156. Complex<Real> SW[COORD_DIM][COORD_DIM];
  1157. Complex<Real> SX[COORD_DIM][COORD_DIM];
  1158. if (interior) {
  1159. PV = (n + 1) * Ynm * rpow[n + 2];
  1160. PW = 0;
  1161. PX = 0;
  1162. Real a, b;
  1163. Real a_r, b_r;
  1164. a = n / (Real)((2 * n + 1) * (2 * n + 3)) * rpow[n + 3]; // pow<Real>(R[i], n+1);
  1165. b = -(n + 1) / (Real)(4 * n + 2) * (rpow[n + 1] - rpow[n + 3]); // (pow<Real>(R[i], n-1) - pow<Real>(R[i], n+1));
  1166. a_r = n / (Real)((2 * n + 1) * (2 * n + 3)) * (n + 1) * rpow[n + 2]; // pow<Real>(R[i], n);
  1167. b_r = -(n + 1) / (Real)(4 * n + 2) * ((n - 1) * rpow[n] - (n + 1) * rpow[n + 2]); // ((n-1) * pow<Real>(R[i], n-2) - (n+1) * pow<Real>(R[i], n));
  1168. SV[0][0] = a_r * Vr + b_r * Wr;
  1169. SV[1][0] = a_r * Vt + b_r * Wt;
  1170. SV[2][0] = a_r * Vp + b_r * Wp;
  1171. SV[0][1] = a * Vr_t + b * Wr_t;
  1172. SV[1][1] = a * Vt_t + b * Wt_t;
  1173. SV[2][1] = a * Vp_t + b * Wp_t;
  1174. SV[0][2] = a * Vr_p + b * Wr_p;
  1175. SV[1][2] = a * Vt_p + b * Wt_p;
  1176. SV[2][2] = a * Vp_p + b * Wp_p;
  1177. a = (n + 1) / (Real)((2 * n + 1) * (2 * n - 1)) * rpow[n + 1]; // pow<Real>(R[i], n-1);
  1178. a_r = (n + 1) / (Real)((2 * n + 1) * (2 * n - 1)) * (n - 1) * rpow[n]; // pow<Real>(R[i], n-2);
  1179. SW[0][0] = a_r * Wr;
  1180. SW[1][0] = a_r * Wt;
  1181. SW[2][0] = a_r * Wp;
  1182. SW[0][1] = a * Wr_t;
  1183. SW[1][1] = a * Wt_t;
  1184. SW[2][1] = a * Wp_t;
  1185. SW[0][2] = a * Wr_p;
  1186. SW[1][2] = a * Wt_p;
  1187. SW[2][2] = a * Wp_p;
  1188. a = 1 / (Real)(2 * n + 1) * rpow[n + 2]; // pow<Real>(R[i], n);
  1189. a_r = 1 / (Real)(2 * n + 1) * (n)*rpow[n + 1]; // pow<Real>(R[i], n-1);
  1190. SX[0][0] = a_r * Xr;
  1191. SX[1][0] = a_r * Xt;
  1192. SX[2][0] = a_r * Xp;
  1193. SX[0][1] = a * Xr_t;
  1194. SX[1][1] = a * Xt_t;
  1195. SX[2][1] = a * Xp_t;
  1196. SX[0][2] = a * Xr_p;
  1197. SX[1][2] = a * Xt_p;
  1198. SX[2][2] = a * Xp_p;
  1199. } else {
  1200. PV = 0;
  1201. PW = n * Ynm * rpow[n + 1];
  1202. PX = 0;
  1203. Real a, b;
  1204. Real a_r, b_r;
  1205. a = n / (Real)((2 * n + 1) * (2 * n + 3)) * rpow[n + 2]; // pow<Real>(R[i], -n-2);
  1206. a_r = n / (Real)((2 * n + 1) * (2 * n + 3)) * (-n - 2) * rpow[n + 3]; // pow<Real>(R[i], -n-3);
  1207. SV[0][0] = a_r * Vr;
  1208. SV[1][0] = a_r * Vt;
  1209. SV[2][0] = a_r * Vp;
  1210. SV[0][1] = a * Vr_t;
  1211. SV[1][1] = a * Vt_t;
  1212. SV[2][1] = a * Vp_t;
  1213. SV[0][2] = a * Vr_p;
  1214. SV[1][2] = a * Vt_p;
  1215. SV[2][2] = a * Vp_p;
  1216. a = (n + 1) / (Real)((2 * n + 1) * (2 * n - 1)) * rpow[n]; // pow<Real>(R[i], -n);
  1217. b = n / (Real)(4 * n + 2) * (rpow[n + 2] - rpow[n]); //(pow<Real>(R[i], -n-2) - pow<Real>(R[i], -n));
  1218. a_r = (n + 1) / (Real)((2 * n + 1) * (2 * n - 1)) * (-n) * rpow[n + 1]; // pow<Real>(R[i], -n-1);
  1219. b_r = n / (Real)(4 * n + 2) * ((-n - 2) * rpow[n + 3] - (-n) * rpow[n + 1]); // ((-n-2)*pow<Real>(R[i], -n-3) - (-n)*pow<Real>(R[i], -n-1));
  1220. SW[0][0] = a_r * Wr + b_r * Vr;
  1221. SW[1][0] = a_r * Wt + b_r * Vt;
  1222. SW[2][0] = a_r * Wp + b_r * Vp;
  1223. SW[0][1] = a * Wr_t + b * Vr_t;
  1224. SW[1][1] = a * Wt_t + b * Vt_t;
  1225. SW[2][1] = a * Wp_t + b * Vp_t;
  1226. SW[0][2] = a * Wr_p + b * Vr_p;
  1227. SW[1][2] = a * Wt_p + b * Vt_p;
  1228. SW[2][2] = a * Wp_p + b * Vp_p;
  1229. a = 1 / (Real)(2 * n + 1) * rpow[n + 1]; // pow<Real>(R[i], -n-1);
  1230. a_r = 1 / (Real)(2 * n + 1) * (-n - 1) * rpow[n + 2]; // pow<Real>(R[i], -n-2);
  1231. SX[0][0] = a_r * Xr;
  1232. SX[1][0] = a_r * Xt;
  1233. SX[2][0] = a_r * Xp;
  1234. SX[0][1] = a * Xr_t;
  1235. SX[1][1] = a * Xt_t;
  1236. SX[2][1] = a * Xp_t;
  1237. SX[0][2] = a * Xr_p;
  1238. SX[1][2] = a * Xt_p;
  1239. SX[2][2] = a * Xp_p;
  1240. }
  1241. Complex<Real> KV[COORD_DIM][COORD_DIM], KW[COORD_DIM][COORD_DIM], KX[COORD_DIM][COORD_DIM];
  1242. KV[0][0] = SV[0][0] + SV[0][0] - PV; KV[0][1] = SV[0][1] + SV[1][0] ; KV[0][2] = SV[0][2] + SV[2][0] ;
  1243. KV[1][0] = SV[1][0] + SV[0][1] ; KV[1][1] = SV[1][1] + SV[1][1] - PV; KV[1][2] = SV[1][2] + SV[2][1] ;
  1244. KV[2][0] = SV[2][0] + SV[0][2] ; KV[2][1] = SV[2][1] + SV[1][2] ; KV[2][2] = SV[2][2] + SV[2][2] - PV;
  1245. KW[0][0] = SW[0][0] + SW[0][0] - PW; KW[0][1] = SW[0][1] + SW[1][0] ; KW[0][2] = SW[0][2] + SW[2][0] ;
  1246. KW[1][0] = SW[1][0] + SW[0][1] ; KW[1][1] = SW[1][1] + SW[1][1] - PW; KW[1][2] = SW[1][2] + SW[2][1] ;
  1247. KW[2][0] = SW[2][0] + SW[0][2] ; KW[2][1] = SW[2][1] + SW[1][2] ; KW[2][2] = SW[2][2] + SW[2][2] - PW;
  1248. KX[0][0] = SX[0][0] + SX[0][0] - PX; KX[0][1] = SX[0][1] + SX[1][0] ; KX[0][2] = SX[0][2] + SX[2][0] ;
  1249. KX[1][0] = SX[1][0] + SX[0][1] ; KX[1][1] = SX[1][1] + SX[1][1] - PX; KX[1][2] = SX[1][2] + SX[2][1] ;
  1250. KX[2][0] = SX[2][0] + SX[0][2] ; KX[2][1] = SX[2][1] + SX[1][2] ; KX[2][2] = SX[2][2] + SX[2][2] - PX;
  1251. write_coeff(KV[0][0]*norm0[0] + KV[0][1]*norm0[1] + KV[0][2]*norm0[2], n, m, 0, 0);
  1252. write_coeff(KV[1][0]*norm0[0] + KV[1][1]*norm0[1] + KV[1][2]*norm0[2], n, m, 0, 1);
  1253. write_coeff(KV[2][0]*norm0[0] + KV[2][1]*norm0[1] + KV[2][2]*norm0[2], n, m, 0, 2);
  1254. write_coeff(KW[0][0]*norm0[0] + KW[0][1]*norm0[1] + KW[0][2]*norm0[2], n, m, 1, 0);
  1255. write_coeff(KW[1][0]*norm0[0] + KW[1][1]*norm0[1] + KW[1][2]*norm0[2], n, m, 1, 1);
  1256. write_coeff(KW[2][0]*norm0[0] + KW[2][1]*norm0[1] + KW[2][2]*norm0[2], n, m, 1, 2);
  1257. write_coeff(KX[0][0]*norm0[0] + KX[0][1]*norm0[1] + KX[0][2]*norm0[2], n, m, 2, 0);
  1258. write_coeff(KX[1][0]*norm0[0] + KX[1][1]*norm0[1] + KX[1][2]*norm0[2], n, m, 2, 1);
  1259. write_coeff(KX[2][0]*norm0[0] + KX[2][1]*norm0[1] + KX[2][2]*norm0[2], n, m, 2, 2);
  1260. }
  1261. }
  1262. }
  1263. { // Set X <-- Q * StokesOp * B1
  1264. if (X.Dim() != N * dof * COORD_DIM) X.ReInit(N * dof * COORD_DIM);
  1265. for (Long k0 = 0; k0 < N; k0++) {
  1266. StaticArray<Real,9> Q;
  1267. { // Set Q
  1268. Real cos_theta = cos(theta_phi[k0 * 2 + 0]);
  1269. Real sin_theta = sin(theta_phi[k0 * 2 + 0]);
  1270. Real cos_phi = cos(theta_phi[k0 * 2 + 1]);
  1271. Real sin_phi = sin(theta_phi[k0 * 2 + 1]);
  1272. Q[0] = sin_theta*cos_phi; Q[1] = sin_theta*sin_phi; Q[2] = cos_theta;
  1273. Q[3] = cos_theta*cos_phi; Q[4] = cos_theta*sin_phi; Q[5] =-sin_theta;
  1274. Q[6] = -sin_phi; Q[7] = cos_phi; Q[8] = 0;
  1275. }
  1276. for (Long k1 = 0; k1 < dof; k1++) { // Set X <-- Q * StokesOp * B1
  1277. StaticArray<Real,COORD_DIM> in;
  1278. for (Long j = 0; j < COORD_DIM; j++) {
  1279. in[j] = 0;
  1280. for (Long i = 0; i < COORD_DIM * M; i++) {
  1281. in[j] += B1[k1][i] * StokesOp[k0 * COORD_DIM + j][i];
  1282. }
  1283. }
  1284. X[(k0 * dof + k1) * COORD_DIM + 0] = Q[0] * in[0] + Q[3] * in[1] + Q[6] * in[2];
  1285. X[(k0 * dof + k1) * COORD_DIM + 1] = Q[1] * in[0] + Q[4] * in[1] + Q[7] * in[2];
  1286. X[(k0 * dof + k1) * COORD_DIM + 2] = Q[2] * in[0] + Q[5] * in[1] + Q[8] * in[2];
  1287. }
  1288. }
  1289. }
  1290. }
  1291. template <class Real> void SphericalHarmonics<Real>::StokesEvalKSelf(const Vector<Real>& S, SHCArrange arrange, Long p0, const Vector<Real>& coord, bool interior, Vector<Real>& X) {
  1292. Long M = (p0+1) * (p0+1);
  1293. Long dof;
  1294. Matrix<Real> B1;
  1295. { // Set B1, dof
  1296. Vector<Real> B0;
  1297. SHCArrange1(S, arrange, p0, B0);
  1298. dof = B0.Dim() / M / COORD_DIM;
  1299. assert(B0.Dim() == dof * COORD_DIM * M);
  1300. B1.ReInit(dof, COORD_DIM * M);
  1301. Vector<Real> B1_(B1.Dim(0) * B1.Dim(1), B1.begin(), false);
  1302. SHCArrange0(B0, p0, B1_, SHCArrange::COL_MAJOR_NONZERO);
  1303. }
  1304. assert(B1.Dim(1) == COORD_DIM * M);
  1305. assert(B1.Dim(0) == dof);
  1306. Long N, p_;
  1307. Matrix<Real> SHBasis;
  1308. Vector<Real> R, theta_phi;
  1309. { // Set N, p_, R, SHBasis
  1310. p_ = p0 + 1;
  1311. Real M_ = (p_+1) * (p_+1);
  1312. N = coord.Dim() / COORD_DIM;
  1313. assert(coord.Dim() == N * COORD_DIM);
  1314. R.ReInit(N);
  1315. theta_phi.ReInit(2 * N);
  1316. for (Long i = 0; i < N; i++) { // Set R, theta_phi
  1317. ConstIterator<Real> x = coord.begin() + i * COORD_DIM;
  1318. R[i] = sqrt<Real>(x[0]*x[0] + x[1]*x[1] + x[2]*x[2]);
  1319. theta_phi[i * 2 + 0] = atan2(sqrt<Real>(x[0]*x[0] + x[1]*x[1]), x[2]);
  1320. theta_phi[i * 2 + 1] = atan2(x[1], x[0]);
  1321. }
  1322. SHBasisEval(p_, theta_phi, SHBasis);
  1323. assert(SHBasis.Dim(1) == M_);
  1324. assert(SHBasis.Dim(0) == N);
  1325. SCTL_UNUSED(M_);
  1326. }
  1327. Matrix<Real> StokesOp(N * COORD_DIM, COORD_DIM * M);
  1328. for (Long i = 0; i < N; i++) { // Set StokesOp
  1329. Real cos_theta, sin_theta, csc_theta, cos_phi, sin_phi;
  1330. { // Set cos_theta, csc_theta, cos_phi, sin_phi
  1331. cos_theta = cos(theta_phi[i * 2 + 0]);
  1332. sin_theta = sin(theta_phi[i * 2 + 0]);
  1333. csc_theta = 1 / sin_theta;
  1334. cos_phi = cos(theta_phi[i * 2 + 1]);
  1335. sin_phi = sin(theta_phi[i * 2 + 1]);
  1336. }
  1337. Complex<Real> imag(0,1), exp_phi(cos_phi, -sin_phi);
  1338. const Real radius = R[i];
  1339. Vector<Real> rpow;
  1340. rpow.ReInit(p0 + 4);
  1341. if (interior) {
  1342. rpow[0] = 1 / (radius * radius);
  1343. for (Long ri = 1; ri < p0 + 4; ri++) rpow[ri] = rpow[ri - 1] * radius; // rpow[n] = r^(n-2)
  1344. } else {
  1345. rpow[0] = 1;
  1346. const Real rinv = 1 / radius;
  1347. for (Long ri = 1; ri < p0 + 4; ri++) rpow[ri] = rpow[ri - 1] * rinv; // rpow[n] = r^(-n)
  1348. }
  1349. for (Long m = 0; m <= p0; m++) {
  1350. for (Long n = m; n <= p0; n++) {
  1351. auto write_coeff = [&](Complex<Real> c, Long n, Long m, Long k0, Long k1) {
  1352. if (0 <= m && m <= n && n <= p0 && 0 <= k0 && k0 < COORD_DIM && 0 <= k1 && k1 < COORD_DIM) {
  1353. Long idx = (2 * p0 - m + 2) * m - (m ? p0+1 : 0) + n;
  1354. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.real;
  1355. if (m) {
  1356. idx += (p0+1-m);
  1357. StokesOp[i * COORD_DIM + k1][k0 * M + idx] = c.imag;
  1358. }
  1359. }
  1360. };
  1361. Complex<Real> Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp;
  1362. { // Set vector spherical harmonics
  1363. auto Y = [&SHBasis,p_,i](Long n, Long m) {
  1364. Complex<Real> c;
  1365. if (0 <= m && m <= n && n <= p_) {
  1366. Long idx = (2 * p_ - m + 2) * m - (m ? p_+1 : 0) + n;
  1367. c.real = SHBasis[i][idx];
  1368. if (m) {
  1369. idx += (p_+1-m);
  1370. c.imag = SHBasis[i][idx];
  1371. }
  1372. }
  1373. return c;
  1374. };
  1375. auto Yt = [exp_phi, &Y, &R, i](Long n, Long m) {
  1376. auto A = (0<=n && m<=n ? 0.5 * sqrt<Real>((n+m)*(n-m+1)) * (m-1==0?2.0:1.0) : 0);
  1377. auto B = (0<=n && m<=n ? 0.5 * sqrt<Real>((n-m)*(n+m+1)) * (m+1==0?2.0:1.0) : 0);
  1378. return (B / exp_phi * Y(n, m + 1) - A * exp_phi * Y(n, m - 1)) / R[i];
  1379. };
  1380. Complex<Real> Y_1 = Y(n + 0, m);
  1381. Complex<Real> Y_1t = Yt(n + 0, m);
  1382. Complex<Real> Ycsc_1 = Y_1 * csc_theta;
  1383. if (fabs(sin_theta) == 0) {
  1384. auto Y_csc0 = [exp_phi, cos_theta](Long n, Long m) {
  1385. if (m == 1) return -sqrt<Real>((2*n+1)*n*(n+1)) * ((n%2==0) && (cos_theta<0) ? -1 : 1) * exp_phi;
  1386. return Complex<Real>(0, 0);
  1387. };
  1388. Ycsc_1 = Y_csc0(n + 0, m);
  1389. }
  1390. auto SetVecSH = [&imag,n,m](Complex<Real>& Vr, Complex<Real>& Vt, Complex<Real>& Vp, Complex<Real>& Wr, Complex<Real>& Wt, Complex<Real>& Wp, Complex<Real>& Xr, Complex<Real>& Xt, Complex<Real>& Xp, const Complex<Real> C0, const Complex<Real> C1, const Complex<Real> C2) {
  1391. Vr = C0 * (-n-1);
  1392. Vt = C2;
  1393. Vp = -imag * m * C1;
  1394. Wr = C0 * n;
  1395. Wt = C2;
  1396. Wp = -imag * m * C1;
  1397. Xr = 0;
  1398. Xt = imag * m * C1;
  1399. Xp = C2;
  1400. };
  1401. { // Set Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp
  1402. auto C0 = Y_1;
  1403. auto C1 = Ycsc_1;
  1404. auto C2 = Y_1t * R[i];
  1405. SetVecSH(Vr, Vt, Vp, Wr, Wt, Wp, Xr, Xt, Xp, C0, C1, C2);
  1406. }
  1407. }
  1408. Complex<Real> SVr, SVt, SVp;
  1409. Complex<Real> SWr, SWt, SWp;
  1410. Complex<Real> SXr, SXt, SXp;
  1411. if (interior) {
  1412. Real a, b;
  1413. a = ((2 * n * n + 4 * n + 3) / (Real)((2 * n + 1) * (2 * n + 3))) * rpow[n + 2]; // pow<Real>(R[i], n);
  1414. b = ((n + 1) * (n - 1) / (Real)(2 * n + 1)) * (rpow[n + 2] - rpow[n]); //(pow<Real>(R[i], n) - pow<Real>(R[i], n - 2));
  1415. SVr = a * Vr + b * Wr;
  1416. SVt = a * Vt + b * Wt;
  1417. SVp = a * Vp + b * Wp;
  1418. a = (2 * (n + 1) * (n - 1) / (Real)((2 * n + 1) * (2 * n - 1))) * rpow[n]; // * pow<Real>(R[i], n - 2);
  1419. SWr = a * Wr;
  1420. SWt = a * Wt;
  1421. SWp = a * Wp;
  1422. a = ((n - 1) / (Real)(2 * n + 1)) * rpow[n + 1]; // pow<Real>(R[i], n - 1);
  1423. SXr = a * Xr;
  1424. SXt = a * Xt;
  1425. SXp = a * Xp;
  1426. } else {
  1427. Real a, b;
  1428. a = -2 * n * (n + 2) / (Real)((2 * n + 1) * (2 * n + 3)) * rpow[n + 3]; // pow<Real>(R[i], -n - 3);
  1429. SVr = a * Vr;
  1430. SVt = a * Vt;
  1431. SVp = a * Vp;
  1432. a = -(2 * n * n + 1) / (Real)((2 * n + 1) * (2 * n - 1)) * rpow[n + 1]; // pow<Real>(R[i], -n - 1);
  1433. b = n * (n + 2) / (Real)(2 * n + 1) * (rpow[n + 1] - rpow[n + 3]); //(pow<Real>(R[i], -n - 1) - pow<Real>(R[i], -n - 3));
  1434. SWr = a * Wr + b * Vr;
  1435. SWt = a * Wt + b * Vt;
  1436. SWp = a * Wp + b * Vp;
  1437. a = -(n + 2) / (Real)(2 * n + 1) * rpow[n + 2]; // pow<Real>(R[i], -n - 2);
  1438. SXr = a * Xr;
  1439. SXt = a * Xt;
  1440. SXp = a * Xp;
  1441. }
  1442. write_coeff(SVr, n, m, 0, 0);
  1443. write_coeff(SVt, n, m, 0, 1);
  1444. write_coeff(SVp, n, m, 0, 2);
  1445. write_coeff(SWr, n, m, 1, 0);
  1446. write_coeff(SWt, n, m, 1, 1);
  1447. write_coeff(SWp, n, m, 1, 2);
  1448. write_coeff(SXr, n, m, 2, 0);
  1449. write_coeff(SXt, n, m, 2, 1);
  1450. write_coeff(SXp, n, m, 2, 2);
  1451. }
  1452. }
  1453. }
  1454. { // Set X <-- Q * StokesOp * B1
  1455. if (X.Dim() != N * dof * COORD_DIM) X.ReInit(N * dof * COORD_DIM);
  1456. for (Long k0 = 0; k0 < N; k0++) {
  1457. StaticArray<Real,9> Q;
  1458. { // Set Q
  1459. Real cos_theta = cos(theta_phi[k0 * 2 + 0]);
  1460. Real sin_theta = sin(theta_phi[k0 * 2 + 0]);
  1461. Real cos_phi = cos(theta_phi[k0 * 2 + 1]);
  1462. Real sin_phi = sin(theta_phi[k0 * 2 + 1]);
  1463. Q[0] = sin_theta*cos_phi; Q[1] = sin_theta*sin_phi; Q[2] = cos_theta;
  1464. Q[3] = cos_theta*cos_phi; Q[4] = cos_theta*sin_phi; Q[5] =-sin_theta;
  1465. Q[6] = -sin_phi; Q[7] = cos_phi; Q[8] = 0;
  1466. }
  1467. for (Long k1 = 0; k1 < dof; k1++) { // Set X <-- Q * StokesOp * B1
  1468. StaticArray<Real,COORD_DIM> in;
  1469. for (Long j = 0; j < COORD_DIM; j++) {
  1470. in[j] = 0;
  1471. for (Long i = 0; i < COORD_DIM * M; i++) {
  1472. in[j] += B1[k1][i] * StokesOp[k0 * COORD_DIM + j][i];
  1473. }
  1474. }
  1475. X[(k0 * dof + k1) * COORD_DIM + 0] = Q[0] * in[0] + Q[3] * in[1] + Q[6] * in[2];
  1476. X[(k0 * dof + k1) * COORD_DIM + 1] = Q[1] * in[0] + Q[4] * in[1] + Q[7] * in[2];
  1477. X[(k0 * dof + k1) * COORD_DIM + 2] = Q[2] * in[0] + Q[5] * in[1] + Q[8] * in[2];
  1478. }
  1479. }
  1480. }
  1481. }
  1482. template <class Real> void SphericalHarmonics<Real>::Grid2SHC_(const Vector<Real>& X, Long Nt, Long Np, Long p1, Vector<Real>& B1){
  1483. const auto& Mf = OpFourierInv(Np);
  1484. assert(Mf.Dim(0) == Np);
  1485. const std::vector<Matrix<Real>>& Ml = SphericalHarmonics<Real>::MatLegendreInv(Nt-1,p1);
  1486. assert((Long)Ml.size() == p1+1);
  1487. Long N = X.Dim() / (Np*Nt);
  1488. assert(X.Dim() == N*Np*Nt);
  1489. Vector<Real> B0((2*p1+1) * N*Nt);
  1490. #pragma omp parallel
  1491. { // B0 <-- Transpose(FFT(X))
  1492. Integer tid=omp_get_thread_num();
  1493. Integer omp_p=omp_get_num_threads();
  1494. Long a=(tid+0)*N*Nt/omp_p;
  1495. Long b=(tid+1)*N*Nt/omp_p;
  1496. Vector<Real> buff(Mf.Dim(1));
  1497. Long fft_coeff_len = std::min(buff.Dim(), 2*p1+2);
  1498. Matrix<Real> B0_(2*p1+1, N*Nt, B0.begin(), false);
  1499. const Matrix<Real> MX(N * Nt, Np, (Iterator<Real>)X.begin(), false);
  1500. for (Long i = a; i < b; i++) {
  1501. { // buff <-- FFT(Xi)
  1502. const Vector<Real> Xi(Np, (Iterator<Real>)X.begin() + Np * i, false);
  1503. Mf.Execute(Xi, buff);
  1504. }
  1505. { // B0 <-- Transpose(buff)
  1506. B0_[0][i] = buff[0]; // skipping buff[1] == 0
  1507. for (Long j = 2; j < fft_coeff_len; j++) B0_[j-1][i] = buff[j];
  1508. for (Long j = fft_coeff_len; j < 2*p1+2; j++) B0_[j-1][i] = 0;
  1509. }
  1510. }
  1511. }
  1512. if (B1.Dim() != N*(p1+1)*(p1+1)) B1.ReInit(N*(p1+1)*(p1+1));
  1513. #pragma omp parallel
  1514. { // Evaluate Legendre polynomial
  1515. Integer tid=omp_get_thread_num();
  1516. Integer omp_p=omp_get_num_threads();
  1517. Long offset0=0;
  1518. Long offset1=0;
  1519. for (Long i = 0; i < p1+1; i++) {
  1520. Long N_ = (i==0 ? N : 2*N);
  1521. Matrix<Real> Min (N_, Nt , B0.begin()+offset0, false);
  1522. Matrix<Real> Mout(N_, p1+1-i, B1.begin()+offset1, false);
  1523. { // Mout = Min * Ml[i] // split between threads
  1524. Long a=(tid+0)*N_/omp_p;
  1525. Long b=(tid+1)*N_/omp_p;
  1526. if (a < b) {
  1527. Matrix<Real> Min_ (b-a, Min .Dim(1), Min [a], false);
  1528. Matrix<Real> Mout_(b-a, Mout.Dim(1), Mout[a], false);
  1529. Matrix<Real>::GEMM(Mout_,Min_,Ml[i]);
  1530. }
  1531. }
  1532. offset0+=Min .Dim(0)*Min .Dim(1);
  1533. offset1+=Mout.Dim(0)*Mout.Dim(1);
  1534. }
  1535. assert(offset0 == B0.Dim());
  1536. assert(offset1 == B1.Dim());
  1537. }
  1538. B1 *= 1 / sqrt<Real>(4 * const_pi<Real>() * Np); // Scaling to match Zydrunas Fortran code.
  1539. }
  1540. template <class Real> void SphericalHarmonics<Real>::SHCArrange0(const Vector<Real>& B1, Long p1, Vector<Real>& S, SHCArrange arrange){
  1541. Long M = (p1+1)*(p1+1);
  1542. Long N = B1.Dim() / M;
  1543. assert(B1.Dim() == N*M);
  1544. if (arrange == SHCArrange::ALL) { // S <-- Rearrange(B1)
  1545. Long M = 2*(p1+1)*(p1+1);
  1546. if(S.Dim() != N * M) S.ReInit(N * M);
  1547. #pragma omp parallel
  1548. { // S <-- Rearrange(B1)
  1549. Integer tid=omp_get_thread_num();
  1550. Integer omp_p=omp_get_num_threads();
  1551. Long a=(tid+0)*N/omp_p;
  1552. Long b=(tid+1)*N/omp_p;
  1553. for (Long i = a; i < b; i++) {
  1554. Long offset = 0;
  1555. for (Long j = 0; j < p1+1; j++) {
  1556. Long len = p1+1 - j;
  1557. if (1) { // Set Real(S_n^m) for m=j and n=j..p
  1558. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1559. Iterator<Real> S_ = S .begin() + i*M + j*(p1+1)*2 + j*2 + 0;
  1560. for (Long k = 0; k < len; k++) S_[k * (p1+1)*2] = B_[k];
  1561. offset += len;
  1562. }
  1563. if (j) { // Set Imag(S_n^m) for m=j and n=j..p
  1564. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1565. Iterator<Real> S_ = S .begin() + i*M + j*(p1+1)*2 + j*2 + 1;
  1566. for (Long k = 0; k < len; k++) S_[k * (p1+1)*2] = B_[k];
  1567. offset += len;
  1568. } else {
  1569. Iterator<Real> S_ = S .begin() + i*M + j*(p1+1)*2 + j*2 + 1;
  1570. for (Long k = 0; k < len; k++) S_[k * (p1+1)*2] = 0;
  1571. }
  1572. }
  1573. }
  1574. }
  1575. }
  1576. if (arrange == SHCArrange::ROW_MAJOR) { // S <-- Rearrange(B1)
  1577. Long M = (p1+1)*(p1+2);
  1578. if(S.Dim() != N * M) S.ReInit(N * M);
  1579. #pragma omp parallel
  1580. { // S <-- Rearrange(B1)
  1581. Integer tid=omp_get_thread_num();
  1582. Integer omp_p=omp_get_num_threads();
  1583. Long a=(tid+0)*N/omp_p;
  1584. Long b=(tid+1)*N/omp_p;
  1585. for (Long i = a; i < b; i++) {
  1586. Long offset = 0;
  1587. for (Long j = 0; j < p1+1; j++) {
  1588. Long len = p1+1 - j;
  1589. if (1) { // Set Real(S_n^m) for m=j and n=j..p
  1590. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1591. Iterator<Real> S_ = S .begin() + i*M + 0;
  1592. for (Long k=0;k<len;k++) S_[(j+k)*(j+k+1) + 2*j] = B_[k];
  1593. offset += len;
  1594. }
  1595. if (j) { // Set Imag(S_n^m) for m=j and n=j..p
  1596. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1597. Iterator<Real> S_ = S .begin() + i*M + 1;
  1598. for (Long k=0;k<len;k++) S_[(j+k)*(j+k+1) + 2*j] = B_[k];
  1599. offset += len;
  1600. } else {
  1601. Iterator<Real> S_ = S .begin() + i*M + 1;
  1602. for (Long k=0;k<len;k++) S_[(j+k)*(j+k+1) + 2*j] = 0;
  1603. }
  1604. }
  1605. }
  1606. }
  1607. }
  1608. if (arrange == SHCArrange::COL_MAJOR_NONZERO) { // S <-- Rearrange(B1)
  1609. Long M = (p1+1)*(p1+1);
  1610. if(S.Dim() != N * M) S.ReInit(N * M);
  1611. #pragma omp parallel
  1612. { // S <-- Rearrange(B1)
  1613. Integer tid=omp_get_thread_num();
  1614. Integer omp_p=omp_get_num_threads();
  1615. Long a=(tid+0)*N/omp_p;
  1616. Long b=(tid+1)*N/omp_p;
  1617. for (Long i = a; i < b; i++) {
  1618. Long offset = 0;
  1619. for (Long j = 0; j < p1+1; j++) {
  1620. Long len = p1+1 - j;
  1621. if (1) { // Set Real(S_n^m) for m=j and n=j..p
  1622. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1623. Iterator<Real> S_ = S .begin() + i*M + offset;
  1624. for (Long k = 0; k < len; k++) S_[k] = B_[k];
  1625. offset += len;
  1626. }
  1627. if (j) { // Set Imag(S_n^m) for m=j and n=j..p
  1628. ConstIterator<Real> B_ = B1.begin() + i*len + N*offset;
  1629. Iterator<Real> S_ = S .begin() + i*M + offset;
  1630. for (Long k = 0; k < len; k++) S_[k] = B_[k];
  1631. offset += len;
  1632. }
  1633. }
  1634. }
  1635. }
  1636. }
  1637. }
  1638. template <class Real> void SphericalHarmonics<Real>::SHCArrange1(const Vector<Real>& S, SHCArrange arrange, Long p0, Vector<Real>& B0){
  1639. Long M, N;
  1640. { // Set M, N
  1641. M = 0;
  1642. if (arrange == SHCArrange::ALL) M = 2*(p0+1)*(p0+1);
  1643. if (arrange == SHCArrange::ROW_MAJOR) M = (p0+1)*(p0+2);
  1644. if (arrange == SHCArrange::COL_MAJOR_NONZERO) M = (p0+1)*(p0+1);
  1645. if (M == 0) return;
  1646. N = S.Dim() / M;
  1647. assert(S.Dim() == N * M);
  1648. }
  1649. if (B0.Dim() != N*(p0+1)*(p0+1)) B0.ReInit(N*(p0+1)*(p0+1));
  1650. if (arrange == SHCArrange::ALL) { // B0 <-- Rearrange(S)
  1651. #pragma omp parallel
  1652. { // B0 <-- Rearrange(S)
  1653. Integer tid=omp_get_thread_num();
  1654. Integer omp_p=omp_get_num_threads();
  1655. Long a=(tid+0)*N/omp_p;
  1656. Long b=(tid+1)*N/omp_p;
  1657. for (Long i = a; i < b; i++) {
  1658. Long offset = 0;
  1659. for (Long j = 0; j < p0+1; j++) {
  1660. Long len = p0+1 - j;
  1661. if (1) { // Get Real(S_n^m) for m=j and n=j..p
  1662. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1663. ConstIterator<Real> S_ = S .begin() + i*M + j*(p0+1)*2 + j*2 + 0;
  1664. for (Long k = 0; k < len; k++) B_[k] = S_[k * (p0+1)*2];
  1665. offset += len;
  1666. }
  1667. if (j) { // Get Imag(S_n^m) for m=j and n=j..p
  1668. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1669. ConstIterator<Real> S_ = S .begin() + i*M + j*(p0+1)*2 + j*2 + 1;
  1670. for (Long k = 0; k < len; k++) B_[k] = S_[k * (p0+1)*2];
  1671. offset += len;
  1672. }
  1673. }
  1674. }
  1675. }
  1676. }
  1677. if (arrange == SHCArrange::ROW_MAJOR) { // B0 <-- Rearrange(S)
  1678. #pragma omp parallel
  1679. { // B0 <-- Rearrange(S)
  1680. Integer tid=omp_get_thread_num();
  1681. Integer omp_p=omp_get_num_threads();
  1682. Long a=(tid+0)*N/omp_p;
  1683. Long b=(tid+1)*N/omp_p;
  1684. for (Long i = a; i < b; i++) {
  1685. Long offset = 0;
  1686. for (Long j = 0; j < p0+1; j++) {
  1687. Long len = p0+1 - j;
  1688. if (1) { // Get Real(S_n^m) for m=j and n=j..p
  1689. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1690. ConstIterator<Real> S_ = S .begin() + i*M + 0;
  1691. for (Long k=0;k<len;k++) B_[k] = S_[(j+k)*(j+k+1) + 2*j];
  1692. offset += len;
  1693. }
  1694. if (j) { // Get Imag(S_n^m) for m=j and n=j..p
  1695. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1696. ConstIterator<Real> S_ = S .begin() + i*M + 1;
  1697. for (Long k=0;k<len;k++) B_[k] = S_[(j+k)*(j+k+1) + 2*j];
  1698. offset += len;
  1699. }
  1700. }
  1701. }
  1702. }
  1703. }
  1704. if (arrange == SHCArrange::COL_MAJOR_NONZERO) { // B0 <-- Rearrange(S)
  1705. #pragma omp parallel
  1706. { // B0 <-- Rearrange(S)
  1707. Integer tid=omp_get_thread_num();
  1708. Integer omp_p=omp_get_num_threads();
  1709. Long a=(tid+0)*N/omp_p;
  1710. Long b=(tid+1)*N/omp_p;
  1711. for (Long i = a; i < b; i++) {
  1712. Long offset = 0;
  1713. for (Long j = 0; j < p0+1; j++) {
  1714. Long len = p0+1 - j;
  1715. if (1) { // Get Real(S_n^m) for m=j and n=j..p
  1716. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1717. ConstIterator<Real> S_ = S .begin() + i*M + offset;
  1718. for (Long k = 0; k < len; k++) B_[k] = S_[k];
  1719. offset += len;
  1720. }
  1721. if (j) { // Get Imag(S_n^m) for m=j and n=j..p
  1722. Iterator<Real> B_ = B0.begin() + i*len + N*offset;
  1723. ConstIterator<Real> S_ = S .begin() + i*M + offset;
  1724. for (Long k = 0; k < len; k++) B_[k] = S_[k];
  1725. offset += len;
  1726. }
  1727. }
  1728. }
  1729. }
  1730. }
  1731. }
  1732. template <class Real> void SphericalHarmonics<Real>::SHC2Grid_(const Vector<Real>& B0, Long p0, Long Nt, Long Np, Vector<Real>* X, Vector<Real>* X_phi, Vector<Real>* X_theta){
  1733. const auto& Mf = OpFourier(Np);
  1734. assert(Mf.Dim(1) == Np);
  1735. const std::vector<Matrix<Real>>& Ml =SphericalHarmonics<Real>::MatLegendre (p0,Nt-1);
  1736. const std::vector<Matrix<Real>>& Mdl=SphericalHarmonics<Real>::MatLegendreGrad(p0,Nt-1);
  1737. assert((Long)Ml .size() == p0+1);
  1738. assert((Long)Mdl.size() == p0+1);
  1739. Long N = B0.Dim() / ((p0+1)*(p0+1));
  1740. assert(B0.Dim() == N*(p0+1)*(p0+1));
  1741. if(X && X ->Dim()!=N*Np*Nt) X ->ReInit(N*Np*Nt);
  1742. if(X_theta && X_theta->Dim()!=N*Np*Nt) X_theta->ReInit(N*Np*Nt);
  1743. if(X_phi && X_phi ->Dim()!=N*Np*Nt) X_phi ->ReInit(N*Np*Nt);
  1744. Vector<Real> B1(N*(2*p0+1)*Nt);
  1745. if(X || X_phi){
  1746. #pragma omp parallel
  1747. { // Evaluate Legendre polynomial
  1748. Integer tid=omp_get_thread_num();
  1749. Integer omp_p=omp_get_num_threads();
  1750. Long offset0=0;
  1751. Long offset1=0;
  1752. for(Long i=0;i<p0+1;i++){
  1753. Long N_ = (i==0 ? N : 2*N);
  1754. const Matrix<Real> Min (N_, p0+1-i, (Iterator<Real>)B0.begin()+offset0, false);
  1755. Matrix<Real> Mout(N_, Nt , B1.begin()+offset1, false);
  1756. { // Mout = Min * Ml[i] // split between threads
  1757. Long a=(tid+0)*N_/omp_p;
  1758. Long b=(tid+1)*N_/omp_p;
  1759. if(a<b){
  1760. const Matrix<Real> Min_ (b-a, Min .Dim(1), (Iterator<Real>)Min [a], false);
  1761. Matrix<Real> Mout_(b-a, Mout.Dim(1), Mout[a], false);
  1762. Matrix<Real>::GEMM(Mout_,Min_,Ml[i]);
  1763. }
  1764. }
  1765. offset0+=Min .Dim(0)*Min .Dim(1);
  1766. offset1+=Mout.Dim(0)*Mout.Dim(1);
  1767. }
  1768. }
  1769. B1 *= sqrt<Real>(4 * const_pi<Real>() * Np); // Scaling to match Zydrunas Fortran code.
  1770. #pragma omp parallel
  1771. { // Transpose and evaluate Fourier
  1772. Integer tid=omp_get_thread_num();
  1773. Integer omp_p=omp_get_num_threads();
  1774. Long a=(tid+0)*N*Nt/omp_p;
  1775. Long b=(tid+1)*N*Nt/omp_p;
  1776. Vector<Real> buff(Mf.Dim(0)); buff = 0;
  1777. Long fft_coeff_len = std::min(buff.Dim(), 2*p0+2);
  1778. Matrix<Real> B1_(2*p0+1, N*Nt, B1.begin(), false);
  1779. for (Long i = a; i < b; i++) {
  1780. { // buff <-- Transpose(B1)
  1781. buff[0] = B1_[0][i];
  1782. buff[1] = 0;
  1783. for (Long j = 2; j < fft_coeff_len; j++) buff[j] = B1_[j-1][i];
  1784. for (Long j = fft_coeff_len; j < buff.Dim(); j++) buff[j] = 0;
  1785. }
  1786. { // X <-- FFT(buff)
  1787. Vector<Real> Xi(Np, X->begin() + Np * i, false);
  1788. Mf.Execute(buff, Xi);
  1789. }
  1790. if(X_phi){ // Evaluate Fourier gradient
  1791. { // buff <-- Transpose(B1)
  1792. buff[0] = 0;
  1793. buff[1] = 0;
  1794. for (Long j = 2; j < fft_coeff_len; j++) buff[j] = B1_[j-1][i];
  1795. for (Long j = fft_coeff_len; j < buff.Dim(); j++) buff[j] = 0;
  1796. for (Long j = 1; j < buff.Dim()/2; j++) {
  1797. Real x = buff[2*j+0];
  1798. Real y = buff[2*j+1];
  1799. buff[2*j+0] = -j*y;
  1800. buff[2*j+1] = j*x;
  1801. }
  1802. }
  1803. { // X_phi <-- FFT(buff)
  1804. Vector<Real> Xi(Np, X_phi->begin() + Np * i, false);
  1805. Mf.Execute(buff, Xi);
  1806. }
  1807. }
  1808. }
  1809. }
  1810. }
  1811. if(X_theta){
  1812. #pragma omp parallel
  1813. { // Evaluate Legendre gradient
  1814. Integer tid=omp_get_thread_num();
  1815. Integer omp_p=omp_get_num_threads();
  1816. Long offset0=0;
  1817. Long offset1=0;
  1818. for(Long i=0;i<p0+1;i++){
  1819. Long N_ = (i==0 ? N : 2*N);
  1820. const Matrix<Real> Min (N_, p0+1-i, (Iterator<Real>)B0.begin()+offset0, false);
  1821. Matrix<Real> Mout(N_, Nt , B1.begin()+offset1, false);
  1822. { // Mout = Min * Mdl[i] // split between threads
  1823. Long a=(tid+0)*N_/omp_p;
  1824. Long b=(tid+1)*N_/omp_p;
  1825. if(a<b){
  1826. const Matrix<Real> Min_ (b-a, Min .Dim(1), (Iterator<Real>)Min [a], false);
  1827. Matrix<Real> Mout_(b-a, Mout.Dim(1), Mout[a], false);
  1828. Matrix<Real>::GEMM(Mout_,Min_,Mdl[i]);
  1829. }
  1830. }
  1831. offset0+=Min .Dim(0)*Min .Dim(1);
  1832. offset1+=Mout.Dim(0)*Mout.Dim(1);
  1833. }
  1834. }
  1835. B1 *= sqrt<Real>(4 * const_pi<Real>() * Np); // Scaling to match Zydrunas Fortran code.
  1836. #pragma omp parallel
  1837. { // Transpose and evaluate Fourier
  1838. Integer tid=omp_get_thread_num();
  1839. Integer omp_p=omp_get_num_threads();
  1840. Long a=(tid+0)*N*Nt/omp_p;
  1841. Long b=(tid+1)*N*Nt/omp_p;
  1842. Vector<Real> buff(Mf.Dim(0)); buff = 0;
  1843. Long fft_coeff_len = std::min(buff.Dim(), 2*p0+2);
  1844. Matrix<Real> B1_(2*p0+1, N*Nt, B1.begin(), false);
  1845. for (Long i = a; i < b; i++) {
  1846. { // buff <-- Transpose(B1)
  1847. buff[0] = B1_[0][i];
  1848. buff[1] = 0;
  1849. for (Long j = 2; j < fft_coeff_len; j++) buff[j] = B1_[j-1][i];
  1850. for (Long j = fft_coeff_len; j < buff.Dim(); j++) buff[j] = 0;
  1851. }
  1852. { // Xi <-- FFT(buff)
  1853. Vector<Real> Xi(Np, X_theta->begin() + Np * i, false);
  1854. Mf.Execute(buff, Xi);
  1855. }
  1856. }
  1857. }
  1858. }
  1859. }
  1860. template <class Real> void SphericalHarmonics<Real>::LegPoly(Vector<Real>& poly_val, const Vector<Real>& X, Long degree){
  1861. Vector<Real> theta(X.Dim());
  1862. for (Long i = 0; i < X.Dim(); i++) theta[i] = acos(X[i]);
  1863. LegPoly_(poly_val, theta, degree);
  1864. }
  1865. template <class Real> void SphericalHarmonics<Real>::LegPoly_(Vector<Real>& poly_val, const Vector<Real>& theta, Long degree){
  1866. Long N = theta.Dim();
  1867. Long Npoly = (degree + 1) * (degree + 2) / 2;
  1868. if (poly_val.Dim() != Npoly * N) poly_val.ReInit(Npoly * N);
  1869. Real fact = 1 / sqrt<Real>(4 * const_pi<Real>());
  1870. Vector<Real> cos_theta(N), sin_theta(N);
  1871. for (Long n = 0; n < N; n++) {
  1872. cos_theta[n] = cos(theta[n]);
  1873. sin_theta[n] = sin(theta[n]);
  1874. poly_val[n] = fact;
  1875. }
  1876. Long idx = 0;
  1877. Long idx_nxt = 0;
  1878. for (Long i = 1; i <= degree; i++) {
  1879. idx_nxt += N*(degree-i+2);
  1880. Real c = sqrt<Real>((2*i+1)/(Real)(2*i));
  1881. for (Long n = 0; n < N; n++) {
  1882. poly_val[idx_nxt+n] = -poly_val[idx+n] * sin_theta[n] * c;
  1883. }
  1884. idx = idx_nxt;
  1885. }
  1886. idx = 0;
  1887. for (Long m = 0; m < degree; m++) {
  1888. for (Long n = 0; n < N; n++) {
  1889. Real pmm = 0;
  1890. Real pmmp1 = poly_val[idx+n];
  1891. for (Long ll = m + 1; ll <= degree; ll++) {
  1892. Real a = sqrt<Real>(((2*ll-1)*(2*ll+1) ) / (Real)((ll-m)*(ll+m) ));
  1893. Real b = sqrt<Real>(((2*ll+1)*(ll+m-1)*(ll-m-1)) / (Real)((ll-m)*(ll+m)*(2*ll-3)));
  1894. Real pll = cos_theta[n]*a*pmmp1 - b*pmm;
  1895. pmm = pmmp1;
  1896. pmmp1 = pll;
  1897. poly_val[idx + N*(ll-m) + n] = pll;
  1898. }
  1899. }
  1900. idx += N * (degree - m + 1);
  1901. }
  1902. }
  1903. template <class Real> void SphericalHarmonics<Real>::LegPolyDeriv(Vector<Real>& poly_val, const Vector<Real>& X, Long degree){
  1904. Vector<Real> theta(X.Dim());
  1905. for (Long i = 0; i < X.Dim(); i++) theta[i] = acos(X[i]);
  1906. LegPolyDeriv_(poly_val, theta, degree);
  1907. }
  1908. template <class Real> void SphericalHarmonics<Real>::LegPolyDeriv_(Vector<Real>& poly_val, const Vector<Real>& theta, Long degree){
  1909. Long N = theta.Dim();
  1910. Long Npoly = (degree + 1) * (degree + 2) / 2;
  1911. if (poly_val.Dim() != N * Npoly) poly_val.ReInit(N * Npoly);
  1912. Vector<Real> cos_theta(N), sin_theta(N);
  1913. for (Long i = 0; i < N; i++) {
  1914. cos_theta[i] = cos(theta[i]);
  1915. sin_theta[i] = sin(theta[i]);
  1916. }
  1917. Vector<Real> leg_poly(Npoly * N);
  1918. LegPoly_(leg_poly, theta, degree);
  1919. for (Long m = 0; m <= degree; m++) {
  1920. for (Long n = m; n <= degree; n++) {
  1921. ConstIterator<Real> Pn = leg_poly.begin() + N * ((degree * 2 - m + 1) * (m + 0) / 2 + n);
  1922. ConstIterator<Real> Pn_ = leg_poly.begin() + N * ((degree * 2 - m + 0) * (m + 1) / 2 + n) * (m < n);
  1923. Iterator <Real> Hn = poly_val.begin() + N * ((degree * 2 - m + 1) * (m + 0) / 2 + n);
  1924. Real c2 = sqrt<Real>(m<n ? (n+m+1)*(n-m) : 0);
  1925. for (Long i = 0; i < N; i++) {
  1926. Real c1 = (sin_theta[i]>0 ? m/sin_theta[i] : 0);
  1927. Hn[i] = c1*cos_theta[i]*Pn[i] + c2*Pn_[i];
  1928. }
  1929. }
  1930. }
  1931. }
  1932. template <class Real> const Vector<Real>& SphericalHarmonics<Real>::LegendreNodes(Long p){
  1933. assert(p<SCTL_SHMAXDEG);
  1934. Vector<Real>& Qx=MatrixStore().Qx_[p];
  1935. #pragma omp critical (SCTL_LEGNODES)
  1936. if(!Qx.Dim()){
  1937. Vector<double> qx1(p+1);
  1938. Vector<double> qw1(p+1);
  1939. cgqf(p+1, 1, 0.0, 0.0, -1.0, 1.0, &qx1[0], &qw1[0]);
  1940. assert(typeid(Real) == typeid(double) || typeid(Real) == typeid(float)); // TODO: works only for float and double
  1941. if (Qx.Dim() != p+1) Qx.ReInit(p+1);
  1942. for (Long i = 0; i < p + 1; i++) Qx[i] = -qx1[i];
  1943. }
  1944. return Qx;
  1945. }
  1946. template <class Real> const Vector<Real>& SphericalHarmonics<Real>::LegendreWeights(Long p){
  1947. assert(p<SCTL_SHMAXDEG);
  1948. Vector<Real>& Qw=MatrixStore().Qw_[p];
  1949. #pragma omp critical (SCTL_LEGWEIGHTS)
  1950. if(!Qw.Dim()){
  1951. Vector<double> qx1(p+1);
  1952. Vector<double> qw1(p+1);
  1953. cgqf(p+1, 1, 0.0, 0.0, -1.0, 1.0, &qx1[0], &qw1[0]);
  1954. assert(typeid(Real) == typeid(double) || typeid(Real) == typeid(float)); // TODO: works only for float and double
  1955. if (Qw.Dim() != p+1) Qw.ReInit(p+1);
  1956. for (Long i = 0; i < p + 1; i++) Qw[i] = qw1[i];
  1957. }
  1958. return Qw;
  1959. }
  1960. template <class Real> const Vector<Real>& SphericalHarmonics<Real>::SingularWeights(Long p1){
  1961. assert(p1<SCTL_SHMAXDEG);
  1962. Vector<Real>& Sw=MatrixStore().Sw_[p1];
  1963. #pragma omp critical (SCTL_SINWEIGHTS)
  1964. if(!Sw.Dim()){
  1965. const Vector<Real>& qx1 = LegendreNodes(p1);
  1966. const Vector<Real>& qw1 = LegendreWeights(p1);
  1967. std::vector<Real> Yf(p1+1,0);
  1968. { // Set Yf
  1969. Vector<Real> x0(1); x0=1.0;
  1970. Vector<Real> alp0((p1+1)*(p1+2)/2);
  1971. LegPoly(alp0, x0, p1);
  1972. Vector<Real> alp((p1+1) * (p1+1)*(p1+2)/2);
  1973. LegPoly(alp, qx1, p1);
  1974. for(Long j=0;j<p1+1;j++){
  1975. for(Long i=0;i<p1+1;i++){
  1976. Yf[i]+=4*M_PI/(2*j+1) * alp0[j] * alp[j*(p1+1)+i];
  1977. }
  1978. }
  1979. }
  1980. Sw.ReInit(p1+1);
  1981. for(Long i=0;i<p1+1;i++){
  1982. Sw[i]=(qw1[i]*M_PI/p1)*Yf[i]/cos(acos(qx1[i])/2);
  1983. }
  1984. }
  1985. return Sw;
  1986. }
  1987. template <class Real> const Matrix<Real>& SphericalHarmonics<Real>::MatFourier(Long p0, Long p1){
  1988. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  1989. Matrix<Real>& Mf =MatrixStore().Mf_ [p0*SCTL_SHMAXDEG+p1];
  1990. #pragma omp critical (SCTL_MATFOURIER)
  1991. if(!Mf.Dim(0)){
  1992. const Real SQRT2PI=sqrt(2*M_PI);
  1993. { // Set Mf
  1994. Matrix<Real> M(2*p0,2*p1);
  1995. for(Long j=0;j<2*p1;j++){
  1996. M[0][j]=SQRT2PI*1.0;
  1997. for(Long k=1;k<p0;k++){
  1998. M[2*k-1][j]=SQRT2PI*cos(j*k*M_PI/p1);
  1999. M[2*k-0][j]=SQRT2PI*sin(j*k*M_PI/p1);
  2000. }
  2001. M[2*p0-1][j]=SQRT2PI*cos(j*p0*M_PI/p1);
  2002. }
  2003. Mf=M;
  2004. }
  2005. }
  2006. return Mf;
  2007. }
  2008. template <class Real> const Matrix<Real>& SphericalHarmonics<Real>::MatFourierInv(Long p0, Long p1){
  2009. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  2010. Matrix<Real>& Mf =MatrixStore().Mfinv_ [p0*SCTL_SHMAXDEG+p1];
  2011. #pragma omp critical (SCTL_MATFOURIERINV)
  2012. if(!Mf.Dim(0)){
  2013. const Real INVSQRT2PI=1.0/sqrt(2*M_PI)/p0;
  2014. { // Set Mf
  2015. Matrix<Real> M(2*p0,2*p1);
  2016. M.SetZero();
  2017. if(p1>p0) p1=p0;
  2018. for(Long j=0;j<2*p0;j++){
  2019. M[j][0]=INVSQRT2PI*0.5;
  2020. for(Long k=1;k<p1;k++){
  2021. M[j][2*k-1]=INVSQRT2PI*cos(j*k*M_PI/p0);
  2022. M[j][2*k-0]=INVSQRT2PI*sin(j*k*M_PI/p0);
  2023. }
  2024. M[j][2*p1-1]=INVSQRT2PI*cos(j*p1*M_PI/p0);
  2025. }
  2026. if(p1==p0) for(Long j=0;j<2*p0;j++) M[j][2*p1-1]*=0.5;
  2027. Mf=M;
  2028. }
  2029. }
  2030. return Mf;
  2031. }
  2032. template <class Real> const Matrix<Real>& SphericalHarmonics<Real>::MatFourierGrad(Long p0, Long p1){
  2033. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  2034. Matrix<Real>& Mdf=MatrixStore().Mdf_[p0*SCTL_SHMAXDEG+p1];
  2035. #pragma omp critical (SCTL_MATFOURIERGRAD)
  2036. if(!Mdf.Dim(0)){
  2037. const Real SQRT2PI=sqrt(2*M_PI);
  2038. { // Set Mdf_
  2039. Matrix<Real> M(2*p0,2*p1);
  2040. for(Long j=0;j<2*p1;j++){
  2041. M[0][j]=SQRT2PI*0.0;
  2042. for(Long k=1;k<p0;k++){
  2043. M[2*k-1][j]=-SQRT2PI*k*sin(j*k*M_PI/p1);
  2044. M[2*k-0][j]= SQRT2PI*k*cos(j*k*M_PI/p1);
  2045. }
  2046. M[2*p0-1][j]=-SQRT2PI*p0*sin(j*p0*M_PI/p1);
  2047. }
  2048. Mdf=M;
  2049. }
  2050. }
  2051. return Mdf;
  2052. }
  2053. template <class Real> const FFT<Real>& SphericalHarmonics<Real>::OpFourier(Long Np){
  2054. assert(Np<SCTL_SHMAXDEG);
  2055. auto& Mf =MatrixStore().Mfftinv_ [Np];
  2056. #pragma omp critical (SCTL_FFT_PLAN0)
  2057. if(!Mf.Dim(0)){
  2058. StaticArray<Long,1> fft_dim = {Np};
  2059. Mf.Setup(FFT_Type::C2R, 1, Vector<Long>(1,fft_dim,false));
  2060. }
  2061. return Mf;
  2062. }
  2063. template <class Real> const FFT<Real>& SphericalHarmonics<Real>::OpFourierInv(Long Np){
  2064. assert(Np<SCTL_SHMAXDEG);
  2065. auto& Mf =MatrixStore().Mfft_ [Np];
  2066. #pragma omp critical (SCTL_FFT_PLAN1)
  2067. if(!Mf.Dim(0)){
  2068. StaticArray<Long,1> fft_dim = {Np};
  2069. Mf.Setup(FFT_Type::R2C, 1, Vector<Long>(1,fft_dim,false));
  2070. }
  2071. return Mf;
  2072. }
  2073. template <class Real> const std::vector<Matrix<Real>>& SphericalHarmonics<Real>::MatLegendre(Long p0, Long p1){
  2074. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  2075. std::vector<Matrix<Real>>& Ml =MatrixStore().Ml_ [p0*SCTL_SHMAXDEG+p1];
  2076. #pragma omp critical (SCTL_MATLEG)
  2077. if(!Ml.size()){
  2078. const Vector<Real>& qx1 = LegendreNodes(p1);
  2079. Vector<Real> alp(qx1.Dim()*(p0+1)*(p0+2)/2);
  2080. LegPoly(alp, qx1, p0);
  2081. Ml.resize(p0+1);
  2082. auto ptr = alp.begin();
  2083. for(Long i=0;i<=p0;i++){
  2084. Ml[i].ReInit(p0+1-i, qx1.Dim(), ptr);
  2085. ptr+=Ml[i].Dim(0)*Ml[i].Dim(1);
  2086. }
  2087. }
  2088. return Ml;
  2089. }
  2090. template <class Real> const std::vector<Matrix<Real>>& SphericalHarmonics<Real>::MatLegendreInv(Long p0, Long p1){
  2091. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  2092. std::vector<Matrix<Real>>& Ml =MatrixStore().Mlinv_ [p0*SCTL_SHMAXDEG+p1];
  2093. #pragma omp critical (SCTL_MATLEGINV)
  2094. if(!Ml.size()){
  2095. const Vector<Real>& qx1 = LegendreNodes(p0);
  2096. const Vector<Real>& qw1 = LegendreWeights(p0);
  2097. Vector<Real> alp(qx1.Dim()*(p1+1)*(p1+2)/2);
  2098. LegPoly(alp, qx1, p1);
  2099. Ml.resize(p1+1);
  2100. auto ptr = alp.begin();
  2101. for(Long i=0;i<=p1;i++){
  2102. Ml[i].ReInit(qx1.Dim(), p1+1-i);
  2103. Matrix<Real> M(p1+1-i, qx1.Dim(), ptr, false);
  2104. for(Long j=0;j<p1+1-i;j++){ // Transpose and weights
  2105. for(Long k=0;k<qx1.Dim();k++){
  2106. Ml[i][k][j]=M[j][k]*qw1[k]*2*M_PI;
  2107. }
  2108. }
  2109. ptr+=Ml[i].Dim(0)*Ml[i].Dim(1);
  2110. }
  2111. }
  2112. return Ml;
  2113. }
  2114. template <class Real> const std::vector<Matrix<Real>>& SphericalHarmonics<Real>::MatLegendreGrad(Long p0, Long p1){
  2115. assert(p0<SCTL_SHMAXDEG && p1<SCTL_SHMAXDEG);
  2116. std::vector<Matrix<Real>>& Mdl=MatrixStore().Mdl_[p0*SCTL_SHMAXDEG+p1];
  2117. #pragma omp critical (SCTL_MATLEGGRAD)
  2118. if(!Mdl.size()){
  2119. const Vector<Real>& qx1 = LegendreNodes(p1);
  2120. Vector<Real> alp(qx1.Dim()*(p0+1)*(p0+2)/2);
  2121. LegPolyDeriv(alp, qx1, p0);
  2122. Mdl.resize(p0+1);
  2123. auto ptr = alp.begin();
  2124. for(Long i=0;i<=p0;i++){
  2125. Mdl[i].ReInit(p0+1-i, qx1.Dim(), ptr);
  2126. ptr+=Mdl[i].Dim(0)*Mdl[i].Dim(1);
  2127. }
  2128. }
  2129. return Mdl;
  2130. }
  2131. template <class Real> void SphericalHarmonics<Real>::SHBasisEval(Long p0, const Vector<Real>& theta_phi, Matrix<Real>& SHBasis) {
  2132. Long M = (p0+1) * (p0+1);
  2133. Long N = theta_phi.Dim() / 2;
  2134. assert(theta_phi.Dim() == N * 2);
  2135. Vector<Complex<Real>> exp_phi(N);
  2136. Matrix<Real> LegP((p0+1)*(p0+2)/2, N);
  2137. { // Set exp_phi, LegP
  2138. Vector<Real> theta(N);
  2139. for (Long i = 0; i < N; i++) { // Set theta, exp_phi
  2140. theta[i] = theta_phi[i*2+0];
  2141. exp_phi[i].real = cos<Real>(theta_phi[i*2+1]);
  2142. exp_phi[i].imag = sin<Real>(theta_phi[i*2+1]);
  2143. }
  2144. Vector<Real> alp(LegP.Dim(0) * LegP.Dim(1), LegP.begin(), false);
  2145. LegPoly_(alp, theta, p0);
  2146. }
  2147. { // Set SHBasis
  2148. SHBasis.ReInit(N, M);
  2149. Real s = 4 * sqrt<Real>(const_pi<Real>());
  2150. for (Long k0 = 0; k0 < N; k0++) {
  2151. Complex<Real> exp_phi_ = 1;
  2152. Complex<Real> exp_phi1 = exp_phi[k0];
  2153. for (Long m = 0; m <= p0; m++) {
  2154. for (Long n = m; n <= p0; n++) {
  2155. Long poly_idx = (2 * p0 - m + 1) * m / 2 + n;
  2156. Long basis_idx = (2 * p0 - m + 2) * m - (m ? p0+1 : 0) + n;
  2157. SHBasis[k0][basis_idx] = LegP[poly_idx][k0] * exp_phi_.real * s;
  2158. if (m) { // imaginary part
  2159. basis_idx += (p0+1-m);
  2160. SHBasis[k0][basis_idx] = -LegP[poly_idx][k0] * exp_phi_.imag * s;
  2161. } else {
  2162. SHBasis[k0][basis_idx] = SHBasis[k0][basis_idx] * 0.5;
  2163. }
  2164. }
  2165. exp_phi_ = exp_phi_ * exp_phi1;
  2166. }
  2167. }
  2168. }
  2169. assert(SHBasis.Dim(0) == N);
  2170. assert(SHBasis.Dim(1) == M);
  2171. }
  2172. template <class Real> void SphericalHarmonics<Real>::VecSHBasisEval(Long p0, const Vector<Real>& theta_phi, Matrix<Real>& SHBasis) {
  2173. Long M = (p0+1) * (p0+1);
  2174. Long N = theta_phi.Dim() / 2;
  2175. assert(theta_phi.Dim() == N * 2);
  2176. Long p_ = p0 + 1;
  2177. Long M_ = (p_+1) * (p_+1);
  2178. Matrix<Real> Ynm(N, M_);
  2179. SHBasisEval(p_, theta_phi, Ynm);
  2180. Vector<Real> cos_theta(N), csc_theta(N);
  2181. for (Long i = 0; i < N; i++) { // Set theta
  2182. cos_theta[i] = cos(theta_phi[i*2+0]);
  2183. csc_theta[i] = 1.0 / sin(theta_phi[i*2+0]);
  2184. }
  2185. { // Set SHBasis
  2186. SHBasis.ReInit(N * COORD_DIM, COORD_DIM * M);
  2187. SHBasis = 0;
  2188. const Complex<Real> imag(0,1);
  2189. for (Long i = 0; i < N; i++) {
  2190. auto Y = [p_, &Ynm, i](Long n, Long m) {
  2191. Complex<Real> c;
  2192. if (0 <= m && m <= n && n <= p_) {
  2193. Long idx = (2 * p_ - m + 2) * m - (m ? p_+1 : 0) + n;
  2194. c.real = Ynm[i][idx];
  2195. if (m) {
  2196. idx += (p_+1-m);
  2197. c.imag = Ynm[i][idx];
  2198. }
  2199. }
  2200. return c;
  2201. };
  2202. auto write_coeff = [p0, &SHBasis, i, M](Complex<Real> c, Long n, Long m, Long k0, Long k1) {
  2203. if (0 <= m && m <= n && n <= p0 && 0 <= k0 && k0 < COORD_DIM && 0 <= k1 && k1 < COORD_DIM) {
  2204. Long idx = (2 * p0 - m + 2) * m - (m ? p0+1 : 0) + n;
  2205. SHBasis[i * COORD_DIM + k1][k0 * M + idx] = c.real;
  2206. if (m) {
  2207. idx += (p0+1-m);
  2208. SHBasis[i * COORD_DIM + k1][k0 * M + idx] = c.imag;
  2209. }
  2210. }
  2211. };
  2212. auto A = [p_](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>(n*n * ((n+1)*(n+1) - m*m) / (Real)((2*n+1)*(2*n+3))) : 0); };
  2213. auto B = [p_](Long n, Long m) { return (0<=n && m<=n && n<=p_ ? sqrt<Real>((n+1)*(n+1) * (n*n - m*m) / (Real)((2*n+1)*(2*n-1))) : 0); };
  2214. if (fabs(csc_theta[i]) > 0) {
  2215. for (Long m = 0; m <= p0; m++) {
  2216. for (Long n = m; n <= p0; n++) {
  2217. Complex<Real> AYBY = A(n,m) * Y(n+1,m) - B(n,m) * Y(n-1,m);
  2218. Complex<Real> Fv2r = Y(n,m) * (-n-1);
  2219. Complex<Real> Fw2r = Y(n,m) * n;
  2220. Complex<Real> Fx2r = 0;
  2221. Complex<Real> Fv2t = AYBY * csc_theta[i];
  2222. Complex<Real> Fw2t = AYBY * csc_theta[i];
  2223. Complex<Real> Fx2t = imag * m * Y(n,m) * csc_theta[i];
  2224. Complex<Real> Fv2p = -imag * m * Y(n,m) * csc_theta[i];
  2225. Complex<Real> Fw2p = -imag * m * Y(n,m) * csc_theta[i];
  2226. Complex<Real> Fx2p = AYBY * csc_theta[i];
  2227. write_coeff(Fv2r, n, m, 0, 0);
  2228. write_coeff(Fw2r, n, m, 1, 0);
  2229. write_coeff(Fx2r, n, m, 2, 0);
  2230. write_coeff(Fv2t, n, m, 0, 1);
  2231. write_coeff(Fw2t, n, m, 1, 1);
  2232. write_coeff(Fx2t, n, m, 2, 1);
  2233. write_coeff(Fv2p, n, m, 0, 2);
  2234. write_coeff(Fw2p, n, m, 1, 2);
  2235. write_coeff(Fx2p, n, m, 2, 2);
  2236. }
  2237. }
  2238. } else {
  2239. Complex<Real> exp_phi;
  2240. exp_phi.real = cos<Real>(theta_phi[i*2+1]);
  2241. exp_phi.imag = -sin<Real>(theta_phi[i*2+1]);
  2242. for (Long m = 0; m <= p0; m++) {
  2243. for (Long n = m; n <= p0; n++) {
  2244. Complex<Real> Fv2r = 0;
  2245. Complex<Real> Fw2r = 0;
  2246. Complex<Real> Fx2r = 0;
  2247. Complex<Real> Fv2t = 0;
  2248. Complex<Real> Fw2t = 0;
  2249. Complex<Real> Fx2t = 0;
  2250. Complex<Real> Fv2p = 0;
  2251. Complex<Real> Fw2p = 0;
  2252. Complex<Real> Fx2p = 0;
  2253. if (m == 0) {
  2254. Fv2r = Y(n,m) * (-n-1);
  2255. Fw2r = Y(n,m) * n;
  2256. Fx2r = 0;
  2257. }
  2258. if (m == 1) {
  2259. auto Ycsc = [&cos_theta, &exp_phi, i](Long n) { return -sqrt<Real>((2*n+1)*n*(n+1)) * ((n%2==0) && (cos_theta[i]<0) ? -1 : 1) * exp_phi; };
  2260. Complex<Real> AYBY = A(n,m) * Ycsc(n+1) - B(n,m) * Ycsc(n-1);
  2261. Fv2t = AYBY;
  2262. Fw2t = AYBY;
  2263. Fx2t = imag * m * Ycsc(n);
  2264. Fv2p =-imag * m * Ycsc(n);
  2265. Fw2p =-imag * m * Ycsc(n);
  2266. Fx2p = AYBY;
  2267. }
  2268. write_coeff(Fv2r, n, m, 0, 0);
  2269. write_coeff(Fw2r, n, m, 1, 0);
  2270. write_coeff(Fx2r, n, m, 2, 0);
  2271. write_coeff(Fv2t, n, m, 0, 1);
  2272. write_coeff(Fw2t, n, m, 1, 1);
  2273. write_coeff(Fx2t, n, m, 2, 1);
  2274. write_coeff(Fv2p, n, m, 0, 2);
  2275. write_coeff(Fw2p, n, m, 1, 2);
  2276. write_coeff(Fx2p, n, m, 2, 2);
  2277. }
  2278. }
  2279. }
  2280. }
  2281. }
  2282. assert(SHBasis.Dim(0) == N * COORD_DIM);
  2283. assert(SHBasis.Dim(1) == COORD_DIM * M);
  2284. }
  2285. template <class Real> const std::vector<Matrix<Real>>& SphericalHarmonics<Real>::MatRotate(Long p0){
  2286. std::vector<std::vector<Long>> coeff_perm(p0+1);
  2287. { // Set coeff_perm
  2288. for(Long n=0;n<=p0;n++) coeff_perm[n].resize(std::min(2*n+1,2*p0));
  2289. Long itr=0;
  2290. for(Long i=0;i<2*p0;i++){
  2291. Long m=(i+1)/2;
  2292. for(Long n=m;n<=p0;n++){
  2293. coeff_perm[n][i]=itr;
  2294. itr++;
  2295. }
  2296. }
  2297. }
  2298. assert(p0<SCTL_SHMAXDEG);
  2299. std::vector<Matrix<Real>>& Mr=MatrixStore().Mr_[p0];
  2300. #pragma omp critical (SCTL_MATROTATE)
  2301. if(!Mr.size()){
  2302. const Real SQRT2PI=sqrt(2*M_PI);
  2303. Long Ncoef=p0*(p0+2);
  2304. Long Ngrid=2*p0*(p0+1);
  2305. Long Naleg=(p0+1)*(p0+2)/2;
  2306. Matrix<Real> Mcoord0(3,Ngrid);
  2307. const Vector<Real>& x=LegendreNodes(p0);
  2308. for(Long i=0;i<p0+1;i++){ // Set Mcoord0
  2309. for(Long j=0;j<2*p0;j++){
  2310. Mcoord0[0][i*2*p0+j]=x[i];
  2311. Mcoord0[1][i*2*p0+j]=sqrt(1-x[i]*x[i])*sin(M_PI*j/p0);
  2312. Mcoord0[2][i*2*p0+j]=sqrt(1-x[i]*x[i])*cos(M_PI*j/p0);
  2313. }
  2314. }
  2315. for(Long l=0;l<p0+1;l++){ // For each rotation angle
  2316. Matrix<Real> Mcoord1;
  2317. { // Rotate coordinates
  2318. Matrix<Real> M(COORD_DIM, COORD_DIM);
  2319. Real cos_=-x[l];
  2320. Real sin_=-sqrt(1.0-x[l]*x[l]);
  2321. M[0][0]= cos_; M[0][1]=0; M[0][2]=-sin_;
  2322. M[1][0]= 0; M[1][1]=1; M[1][2]= 0;
  2323. M[2][0]= sin_; M[2][1]=0; M[2][2]= cos_;
  2324. Mcoord1=M*Mcoord0;
  2325. }
  2326. Matrix<Real> Mleg(Naleg, Ngrid);
  2327. { // Set Mleg
  2328. const Vector<Real> Vcoord1(Mcoord1.Dim(0)*Mcoord1.Dim(1), Mcoord1.begin(), false);
  2329. Vector<Real> Vleg(Mleg.Dim(0)*Mleg.Dim(1), Mleg.begin(), false);
  2330. LegPoly(Vleg, Vcoord1, p0);
  2331. }
  2332. Vector<Real> theta(Ngrid);
  2333. for(Long i=0;i<theta.Dim();i++){ // Set theta
  2334. theta[i]=atan2(Mcoord1[1][i],Mcoord1[2][i]); // TODO: works only for float and double
  2335. }
  2336. Matrix<Real> Mcoef2grid(Ncoef, Ngrid);
  2337. { // Build Mcoef2grid
  2338. Long offset0=0;
  2339. Long offset1=0;
  2340. for(Long i=0;i<p0+1;i++){
  2341. Long len=p0+1-i;
  2342. { // P * cos
  2343. for(Long j=0;j<len;j++){
  2344. for(Long k=0;k<Ngrid;k++){
  2345. Mcoef2grid[offset1+j][k]=SQRT2PI*Mleg[offset0+j][k]*cos(i*theta[k]);
  2346. }
  2347. }
  2348. offset1+=len;
  2349. }
  2350. if(i!=0 && i!=p0){ // P * sin
  2351. for(Long j=0;j<len;j++){
  2352. for(Long k=0;k<Ngrid;k++){
  2353. Mcoef2grid[offset1+j][k]=SQRT2PI*Mleg[offset0+j][k]*sin(i*theta[k]);
  2354. }
  2355. }
  2356. offset1+=len;
  2357. }
  2358. offset0+=len;
  2359. }
  2360. assert(offset0==Naleg);
  2361. assert(offset1==Ncoef);
  2362. }
  2363. Vector<Real> Vcoef2coef(Ncoef*Ncoef);
  2364. Vector<Real> Vcoef2grid(Ncoef*Ngrid, Mcoef2grid[0], false);
  2365. Grid2SHC(Vcoef2grid, p0+1, 2*p0, p0, Vcoef2coef, SHCArrange::COL_MAJOR_NONZERO);
  2366. Matrix<Real> Mcoef2coef(Ncoef, Ncoef, Vcoef2coef.begin(), false);
  2367. for(Long n=0;n<=p0;n++){ // Create matrices for fast rotation
  2368. Matrix<Real> M(coeff_perm[n].size(),coeff_perm[n].size());
  2369. for(Long i=0;i<(Long)coeff_perm[n].size();i++){
  2370. for(Long j=0;j<(Long)coeff_perm[n].size();j++){
  2371. M[i][j]=Mcoef2coef[coeff_perm[n][i]][coeff_perm[n][j]];
  2372. }
  2373. }
  2374. Mr.push_back(M);
  2375. }
  2376. }
  2377. }
  2378. return Mr;
  2379. }
  2380. template <class Real> void SphericalHarmonics<Real>::SHC2GridTranspose(const Vector<Real>& X, Long p0, Long p1, Vector<Real>& S){
  2381. Matrix<Real> Mf =SphericalHarmonics<Real>::MatFourier(p1,p0).Transpose();
  2382. std::vector<Matrix<Real>> Ml =SphericalHarmonics<Real>::MatLegendre(p1,p0);
  2383. for(Long i=0;i<(Long)Ml.size();i++) Ml[i]=Ml[i].Transpose();
  2384. assert(p1==(Long)Ml.size()-1);
  2385. assert(p0==Mf.Dim(0)/2);
  2386. assert(p1==Mf.Dim(1)/2);
  2387. Long N=X.Dim()/(2*p0*(p0+1));
  2388. assert(N*2*p0*(p0+1)==X.Dim());
  2389. if(S.Dim()!=N*(p1*(p1+2))) S.ReInit(N*(p1*(p1+2)));
  2390. Vector<Real> B0, B1;
  2391. B0.ReInit(N* p1*(p1+2));
  2392. B1.ReInit(N*2*p1*(p0+1));
  2393. #pragma omp parallel
  2394. { // Evaluate Fourier and transpose
  2395. Integer tid=omp_get_thread_num();
  2396. Integer omp_p=omp_get_num_threads();
  2397. Long a=(tid+0)*N*(p0+1)/omp_p;
  2398. Long b=(tid+1)*N*(p0+1)/omp_p;
  2399. const Long block_size=16;
  2400. Matrix<Real> B2(block_size,2*p1);
  2401. for(Long i0=a;i0<b;i0+=block_size){
  2402. Long i1=std::min(b,i0+block_size);
  2403. const Matrix<Real> Min (i1-i0,2*p0, (Iterator<Real>)X.begin()+i0*2*p0, false);
  2404. Matrix<Real> Mout(i1-i0,2*p1, B2.begin(), false);
  2405. Matrix<Real>::GEMM(Mout, Min, Mf);
  2406. for(Long i=i0;i<i1;i++){
  2407. for(Long j=0;j<2*p1;j++){
  2408. B1[j*N*(p0+1)+i]=B2[i-i0][j];
  2409. }
  2410. }
  2411. }
  2412. }
  2413. #pragma omp parallel
  2414. { // Evaluate Legendre polynomial
  2415. Integer tid=omp_get_thread_num();
  2416. Integer omp_p=omp_get_num_threads();
  2417. Long offset0=0;
  2418. Long offset1=0;
  2419. for(Long i=0;i<p1+1;i++){
  2420. Long N0=2*N;
  2421. if(i==0 || i==p1) N0=N;
  2422. Matrix<Real> Min (N0, p0+1 , B1.begin()+offset0, false);
  2423. Matrix<Real> Mout(N0, p1+1-i, B0.begin()+offset1, false);
  2424. { // Mout = Min * Ml[i] // split between threads
  2425. Long a=(tid+0)*N0/omp_p;
  2426. Long b=(tid+1)*N0/omp_p;
  2427. if(a<b){
  2428. Matrix<Real> Min_ (b-a, Min .Dim(1), Min [a], false);
  2429. Matrix<Real> Mout_(b-a, Mout.Dim(1), Mout[a], false);
  2430. Matrix<Real>::GEMM(Mout_,Min_,Ml[i]);
  2431. }
  2432. }
  2433. offset0+=Min .Dim(0)*Min .Dim(1);
  2434. offset1+=Mout.Dim(0)*Mout.Dim(1);
  2435. }
  2436. }
  2437. #pragma omp parallel
  2438. { // S <-- Rearrange(B0)
  2439. Integer tid=omp_get_thread_num();
  2440. Integer omp_p=omp_get_num_threads();
  2441. Long a=(tid+0)*N/omp_p;
  2442. Long b=(tid+1)*N/omp_p;
  2443. for(Long i=a;i<b;i++){
  2444. Long offset=0;
  2445. for(Long j=0;j<2*p1;j++){
  2446. Long len=p1+1-(j+1)/2;
  2447. Real* B_=&B0[i*len+N*offset];
  2448. Real* S_=&S[i*p1*(p1+2)+offset];
  2449. for(Long k=0;k<len;k++) S_[k]=B_[k];
  2450. offset+=len;
  2451. }
  2452. }
  2453. }
  2454. }
  2455. template <class Real> void SphericalHarmonics<Real>::RotateAll(const Vector<Real>& S, Long p0, Long dof, Vector<Real>& S_){
  2456. const std::vector<Matrix<Real>>& Mr=MatRotate(p0);
  2457. std::vector<std::vector<Long>> coeff_perm(p0+1);
  2458. { // Set coeff_perm
  2459. for(Long n=0;n<=p0;n++) coeff_perm[n].resize(std::min(2*n+1,2*p0));
  2460. Long itr=0;
  2461. for(Long i=0;i<2*p0;i++){
  2462. Long m=(i+1)/2;
  2463. for(Long n=m;n<=p0;n++){
  2464. coeff_perm[n][i]=itr;
  2465. itr++;
  2466. }
  2467. }
  2468. }
  2469. Long Ncoef=p0*(p0+2);
  2470. Long N=S.Dim()/Ncoef/dof;
  2471. assert(N*Ncoef*dof==S.Dim());
  2472. if(S_.Dim()!=N*dof*Ncoef*p0*(p0+1)) S_.ReInit(N*dof*Ncoef*p0*(p0+1));
  2473. const Matrix<Real> S0(N*dof, Ncoef, (Iterator<Real>)S.begin(), false);
  2474. Matrix<Real> S1(N*dof*p0*(p0+1), Ncoef, S_.begin(), false);
  2475. #pragma omp parallel
  2476. { // Construct all p0*(p0+1) rotations
  2477. Integer tid=omp_get_thread_num();
  2478. Integer omp_p=omp_get_num_threads();
  2479. Matrix<Real> B0(dof*p0,Ncoef); // memory buffer
  2480. std::vector<Matrix<Real>> Bi(p0+1), Bo(p0+1); // memory buffers
  2481. for(Long i=0;i<=p0;i++){ // initialize Bi, Bo
  2482. Bi[i].ReInit(dof*p0,coeff_perm[i].size());
  2483. Bo[i].ReInit(dof*p0,coeff_perm[i].size());
  2484. }
  2485. Long a=(tid+0)*N/omp_p;
  2486. Long b=(tid+1)*N/omp_p;
  2487. for(Long i=a;i<b;i++){
  2488. for(Long d=0;d<dof;d++){
  2489. for(Long j=0;j<p0;j++){
  2490. Long offset=0;
  2491. for(Long k=0;k<p0+1;k++){
  2492. Real r[2]={cos(k*j*M_PI/p0),-sin(k*j*M_PI/p0)}; // exp(i*k*theta)
  2493. Long len=p0+1-k;
  2494. if(k!=0 && k!=p0){
  2495. for(Long l=0;l<len;l++){
  2496. Real x[2];
  2497. x[0]=S0[i*dof+d][offset+len*0+l];
  2498. x[1]=S0[i*dof+d][offset+len*1+l];
  2499. B0[j*dof+d][offset+len*0+l]=x[0]*r[0]-x[1]*r[1];
  2500. B0[j*dof+d][offset+len*1+l]=x[0]*r[1]+x[1]*r[0];
  2501. }
  2502. offset+=2*len;
  2503. }else{
  2504. for(Long l=0;l<len;l++){
  2505. B0[j*dof+d][offset+l]=S0[i*dof+d][offset+l];
  2506. }
  2507. offset+=len;
  2508. }
  2509. }
  2510. assert(offset==Ncoef);
  2511. }
  2512. }
  2513. { // Fast rotation
  2514. for(Long k=0;k<dof*p0;k++){ // forward permutation
  2515. for(Long l=0;l<=p0;l++){
  2516. for(Long j=0;j<(Long)coeff_perm[l].size();j++){
  2517. Bi[l][k][j]=B0[k][coeff_perm[l][j]];
  2518. }
  2519. }
  2520. }
  2521. for(Long t=0;t<=p0;t++){
  2522. for(Long l=0;l<=p0;l++){ // mat-vec
  2523. Matrix<Real>::GEMM(Bo[l],Bi[l],Mr[t*(p0+1)+l]);
  2524. }
  2525. Matrix<Real> Mout(dof*p0,Ncoef, S1[(i*(p0+1)+t)*dof*p0], false);
  2526. for(Long k=0;k<dof*p0;k++){ // reverse permutation
  2527. for(Long l=0;l<=p0;l++){
  2528. for(Long j=0;j<(Long)coeff_perm[l].size();j++){
  2529. Mout[k][coeff_perm[l][j]]=Bo[l][k][j];
  2530. }
  2531. }
  2532. }
  2533. }
  2534. }
  2535. }
  2536. }
  2537. }
  2538. template <class Real> void SphericalHarmonics<Real>::RotateTranspose(const Vector<Real>& S_, Long p0, Long dof, Vector<Real>& S){
  2539. std::vector<Matrix<Real>> Mr=MatRotate(p0);
  2540. for(Long i=0;i<(Long)Mr.size();i++) Mr[i]=Mr[i].Transpose();
  2541. std::vector<std::vector<Long>> coeff_perm(p0+1);
  2542. { // Set coeff_perm
  2543. for(Long n=0;n<=p0;n++) coeff_perm[n].resize(std::min(2*n+1,2*p0));
  2544. Long itr=0;
  2545. for(Long i=0;i<2*p0;i++){
  2546. Long m=(i+1)/2;
  2547. for(Long n=m;n<=p0;n++){
  2548. coeff_perm[n][i]=itr;
  2549. itr++;
  2550. }
  2551. }
  2552. }
  2553. Long Ncoef=p0*(p0+2);
  2554. Long N=S_.Dim()/Ncoef/dof/(p0*(p0+1));
  2555. assert(N*Ncoef*dof*(p0*(p0+1))==S_.Dim());
  2556. if(S.Dim()!=N*dof*Ncoef*p0*(p0+1)) S.ReInit(N*dof*Ncoef*p0*(p0+1));
  2557. Matrix<Real> S0(N*dof*p0*(p0+1), Ncoef, S.begin(), false);
  2558. const Matrix<Real> S1(N*dof*p0*(p0+1), Ncoef, (Iterator<Real>)S_.begin(), false);
  2559. #pragma omp parallel
  2560. { // Transpose all p0*(p0+1) rotations
  2561. Integer tid=omp_get_thread_num();
  2562. Integer omp_p=omp_get_num_threads();
  2563. Matrix<Real> B0(dof*p0,Ncoef); // memory buffer
  2564. std::vector<Matrix<Real>> Bi(p0+1), Bo(p0+1); // memory buffers
  2565. for(Long i=0;i<=p0;i++){ // initialize Bi, Bo
  2566. Bi[i].ReInit(dof*p0,coeff_perm[i].size());
  2567. Bo[i].ReInit(dof*p0,coeff_perm[i].size());
  2568. }
  2569. Long a=(tid+0)*N/omp_p;
  2570. Long b=(tid+1)*N/omp_p;
  2571. for(Long i=a;i<b;i++){
  2572. for(Long t=0;t<p0+1;t++){
  2573. Long idx0=(i*(p0+1)+t)*p0*dof;
  2574. { // Fast rotation
  2575. const Matrix<Real> Min(p0*dof, Ncoef, (Iterator<Real>)S1[idx0], false);
  2576. for(Long k=0;k<dof*p0;k++){ // forward permutation
  2577. for(Long l=0;l<=p0;l++){
  2578. for(Long j=0;j<(Long)coeff_perm[l].size();j++){
  2579. Bi[l][k][j]=Min[k][coeff_perm[l][j]];
  2580. }
  2581. }
  2582. }
  2583. for(Long l=0;l<=p0;l++){ // mat-vec
  2584. Matrix<Real>::GEMM(Bo[l],Bi[l],Mr[t*(p0+1)+l]);
  2585. }
  2586. for(Long k=0;k<dof*p0;k++){ // reverse permutation
  2587. for(Long l=0;l<=p0;l++){
  2588. for(Long j=0;j<(Long)coeff_perm[l].size();j++){
  2589. B0[k][coeff_perm[l][j]]=Bo[l][k][j];
  2590. }
  2591. }
  2592. }
  2593. }
  2594. for(Long j=0;j<p0;j++){
  2595. for(Long d=0;d<dof;d++){
  2596. Long idx1=idx0+j*dof+d;
  2597. Long offset=0;
  2598. for(Long k=0;k<p0+1;k++){
  2599. Real r[2]={cos(k*j*M_PI/p0),sin(k*j*M_PI/p0)}; // exp(i*k*theta)
  2600. Long len=p0+1-k;
  2601. if(k!=0 && k!=p0){
  2602. for(Long l=0;l<len;l++){
  2603. Real x[2];
  2604. x[0]=B0[j*dof+d][offset+len*0+l];
  2605. x[1]=B0[j*dof+d][offset+len*1+l];
  2606. S0[idx1][offset+len*0+l]=x[0]*r[0]-x[1]*r[1];
  2607. S0[idx1][offset+len*1+l]=x[0]*r[1]+x[1]*r[0];
  2608. }
  2609. offset+=2*len;
  2610. }else{
  2611. for(Long l=0;l<len;l++){
  2612. S0[idx1][offset+l]=B0[j*dof+d][offset+l];
  2613. }
  2614. offset+=len;
  2615. }
  2616. }
  2617. assert(offset==Ncoef);
  2618. }
  2619. }
  2620. }
  2621. }
  2622. }
  2623. }
  2624. template <class Real> void SphericalHarmonics<Real>::StokesSingularInteg(const Vector<Real>& S, Long p0, Long p1, Vector<Real>* SLMatrix, Vector<Real>* DLMatrix){
  2625. Long Ngrid=2*p0*(p0+1);
  2626. Long Ncoef= p0*(p0+2);
  2627. Long Nves=S.Dim()/(Ngrid*COORD_DIM);
  2628. if(SLMatrix) SLMatrix->ReInit(Nves*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM));
  2629. if(DLMatrix) DLMatrix->ReInit(Nves*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM));
  2630. Long BLOCK_SIZE=(Long)6e9/((3*2*p1*(p1+1))*(3*2*p0*(p0+1))*2*8); // Limit memory usage to 6GB
  2631. BLOCK_SIZE=std::min<Long>(BLOCK_SIZE,omp_get_max_threads());
  2632. BLOCK_SIZE=std::max<Long>(BLOCK_SIZE,1);
  2633. for(Long a=0;a<Nves;a+=BLOCK_SIZE){
  2634. Long b=std::min(a+BLOCK_SIZE, Nves);
  2635. Vector<Real> _SLMatrix, _DLMatrix;
  2636. if(SLMatrix) _SLMatrix.ReInit((b-a)*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM), SLMatrix->begin()+a*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM), false);
  2637. if(DLMatrix) _DLMatrix.ReInit((b-a)*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM), DLMatrix->begin()+a*(Ncoef*COORD_DIM)*(Ncoef*COORD_DIM), false);
  2638. const Vector<Real> _S ((b-a)*(Ngrid*COORD_DIM) , (Iterator<Real>)S.begin()+a*(Ngrid*COORD_DIM), false);
  2639. if(SLMatrix && DLMatrix) StokesSingularInteg_< true, true>(_S, p0, p1, _SLMatrix, _DLMatrix);
  2640. else if(SLMatrix) StokesSingularInteg_< true, false>(_S, p0, p1, _SLMatrix, _DLMatrix);
  2641. else if(DLMatrix) StokesSingularInteg_<false, true>(_S, p0, p1, _SLMatrix, _DLMatrix);
  2642. }
  2643. }
  2644. template <class Real> template <bool SLayer, bool DLayer> void SphericalHarmonics<Real>::StokesSingularInteg_(const Vector<Real>& X0, Long p0, Long p1, Vector<Real>& SL, Vector<Real>& DL){
  2645. Profile::Tic("Rotate");
  2646. Vector<Real> S0, S;
  2647. SphericalHarmonics<Real>::Grid2SHC(X0, p0+1, 2*p0, p0, S0, SHCArrange::COL_MAJOR_NONZERO);
  2648. SphericalHarmonics<Real>::RotateAll(S0, p0, COORD_DIM, S);
  2649. Profile::Toc();
  2650. Profile::Tic("Upsample");
  2651. Vector<Real> X, X_theta, X_phi, trg;
  2652. SphericalHarmonics<Real>::SHC2Grid(S, SHCArrange::COL_MAJOR_NONZERO, p0, p1+1, 2*p1, &X, &X_theta, &X_phi);
  2653. SphericalHarmonics<Real>::SHC2Pole(S, SHCArrange::COL_MAJOR_NONZERO, p0, trg);
  2654. Profile::Toc();
  2655. Profile::Tic("Stokes");
  2656. Vector<Real> SL0, DL0;
  2657. { // Stokes kernel
  2658. //Long M0=2*p0*(p0+1);
  2659. Long M1=2*p1*(p1+1);
  2660. Long N=trg.Dim()/(2*COORD_DIM);
  2661. assert(X.Dim()==M1*COORD_DIM*N);
  2662. if(SLayer && SL0.Dim()!=N*2*6*M1) SL0.ReInit(2*N*6*M1);
  2663. if(DLayer && DL0.Dim()!=N*2*6*M1) DL0.ReInit(2*N*6*M1);
  2664. const Vector<Real>& qw=SphericalHarmonics<Real>::SingularWeights(p1);
  2665. const Real scal_const_dl = 3.0/(4.0*M_PI);
  2666. const Real scal_const_sl = 1.0/(8.0*M_PI);
  2667. static Real eps=-1;
  2668. if(eps<0){
  2669. eps=1;
  2670. while(eps*(Real)0.5+(Real)1.0>1.0) eps*=0.5;
  2671. }
  2672. #pragma omp parallel
  2673. {
  2674. Integer tid=omp_get_thread_num();
  2675. Integer omp_p=omp_get_num_threads();
  2676. Long a=(tid+0)*N/omp_p;
  2677. Long b=(tid+1)*N/omp_p;
  2678. for(Long i=a;i<b;i++){
  2679. for(Long t=0;t<2;t++){
  2680. Real tx, ty, tz;
  2681. { // Read target coordinates
  2682. tx=trg[i*2*COORD_DIM+0*2+t];
  2683. ty=trg[i*2*COORD_DIM+1*2+t];
  2684. tz=trg[i*2*COORD_DIM+2*2+t];
  2685. }
  2686. for(Long j0=0;j0<p1+1;j0++){
  2687. for(Long j1=0;j1<2*p1;j1++){
  2688. Long s=2*p1*j0+j1;
  2689. Real dx, dy, dz;
  2690. { // Compute dx, dy, dz
  2691. dx=tx-X[(i*COORD_DIM+0)*M1+s];
  2692. dy=ty-X[(i*COORD_DIM+1)*M1+s];
  2693. dz=tz-X[(i*COORD_DIM+2)*M1+s];
  2694. }
  2695. Real nx, ny, nz;
  2696. { // Compute source normal
  2697. Real x_theta=X_phi[(i*COORD_DIM+0)*M1+s];
  2698. Real y_theta=X_phi[(i*COORD_DIM+1)*M1+s];
  2699. Real z_theta=X_phi[(i*COORD_DIM+2)*M1+s];
  2700. Real x_phi=X_theta[(i*COORD_DIM+0)*M1+s];
  2701. Real y_phi=X_theta[(i*COORD_DIM+1)*M1+s];
  2702. Real z_phi=X_theta[(i*COORD_DIM+2)*M1+s];
  2703. nx=(y_theta*z_phi-z_theta*y_phi);
  2704. ny=(z_theta*x_phi-x_theta*z_phi);
  2705. nz=(x_theta*y_phi-y_theta*x_phi);
  2706. }
  2707. Real area_elem=1.0;
  2708. if(SLayer){ // Compute area_elem
  2709. area_elem=sqrt(nx*nx+ny*ny+nz*nz);
  2710. }
  2711. Real rinv, rinv2;
  2712. { // Compute rinv, rinv2
  2713. Real r2=dx*dx+dy*dy+dz*dz;
  2714. rinv=1.0/sqrt(r2);
  2715. if(r2<=eps) rinv=0;
  2716. rinv2=rinv*rinv;
  2717. }
  2718. if(DLayer){
  2719. Real rinv5=rinv2*rinv2*rinv;
  2720. Real r_dot_n_rinv5=scal_const_dl*qw[j0*t+(p1-j0)*(1-t)] * (nx*dx+ny*dy+nz*dz)*rinv5;
  2721. DL0[((i*2+t)*6+0)*M1+s]=dx*dx*r_dot_n_rinv5;
  2722. DL0[((i*2+t)*6+1)*M1+s]=dx*dy*r_dot_n_rinv5;
  2723. DL0[((i*2+t)*6+2)*M1+s]=dx*dz*r_dot_n_rinv5;
  2724. DL0[((i*2+t)*6+3)*M1+s]=dy*dy*r_dot_n_rinv5;
  2725. DL0[((i*2+t)*6+4)*M1+s]=dy*dz*r_dot_n_rinv5;
  2726. DL0[((i*2+t)*6+5)*M1+s]=dz*dz*r_dot_n_rinv5;
  2727. }
  2728. if(SLayer){
  2729. Real area_rinv =scal_const_sl*qw[j0*t+(p1-j0)*(1-t)] * area_elem*rinv;
  2730. Real area_rinv2=area_rinv*rinv2;
  2731. SL0[((i*2+t)*6+0)*M1+s]=area_rinv+dx*dx*area_rinv2;
  2732. SL0[((i*2+t)*6+1)*M1+s]= dx*dy*area_rinv2;
  2733. SL0[((i*2+t)*6+2)*M1+s]= dx*dz*area_rinv2;
  2734. SL0[((i*2+t)*6+3)*M1+s]=area_rinv+dy*dy*area_rinv2;
  2735. SL0[((i*2+t)*6+4)*M1+s]= dy*dz*area_rinv2;
  2736. SL0[((i*2+t)*6+5)*M1+s]=area_rinv+dz*dz*area_rinv2;
  2737. }
  2738. }
  2739. }
  2740. }
  2741. }
  2742. }
  2743. Profile::Add_FLOP(20*(2*p1)*(p1+1)*2*N);
  2744. if(SLayer) Profile::Add_FLOP((19+6)*(2*p1)*(p1+1)*2*N);
  2745. if(DLayer) Profile::Add_FLOP( 22 *(2*p1)*(p1+1)*2*N);
  2746. }
  2747. Profile::Toc();
  2748. Profile::Tic("UpsampleTranspose");
  2749. Vector<Real> SL1, DL1;
  2750. SphericalHarmonics<Real>::SHC2GridTranspose(SL0, p1, p0, SL1);
  2751. SphericalHarmonics<Real>::SHC2GridTranspose(DL0, p1, p0, DL1);
  2752. Profile::Toc();
  2753. Profile::Tic("RotateTranspose");
  2754. Vector<Real> SL2, DL2;
  2755. SphericalHarmonics<Real>::RotateTranspose(SL1, p0, 2*6, SL2);
  2756. SphericalHarmonics<Real>::RotateTranspose(DL1, p0, 2*6, DL2);
  2757. Profile::Toc();
  2758. Profile::Tic("Rearrange");
  2759. Vector<Real> SL3, DL3;
  2760. { // Transpose
  2761. Long Ncoef=p0*(p0+2);
  2762. Long Ngrid=2*p0*(p0+1);
  2763. { // Transpose SL2
  2764. Long N=SL2.Dim()/(6*Ncoef*Ngrid);
  2765. SL3.ReInit(N*COORD_DIM*Ncoef*COORD_DIM*Ngrid);
  2766. #pragma omp parallel
  2767. {
  2768. Integer tid=omp_get_thread_num();
  2769. Integer omp_p=omp_get_num_threads();
  2770. Matrix<Real> B(COORD_DIM*Ncoef,Ngrid*COORD_DIM);
  2771. Long a=(tid+0)*N/omp_p;
  2772. Long b=(tid+1)*N/omp_p;
  2773. for(Long i=a;i<b;i++){
  2774. Matrix<Real> M0(Ngrid*6, Ncoef, SL2.begin()+i*Ngrid*6*Ncoef, false);
  2775. for(Long k=0;k<Ncoef;k++){ // Transpose
  2776. for(Long j=0;j<Ngrid;j++){ // TODO: needs blocking
  2777. B[k+Ncoef*0][j*COORD_DIM+0]=M0[j*6+0][k];
  2778. B[k+Ncoef*1][j*COORD_DIM+0]=M0[j*6+1][k];
  2779. B[k+Ncoef*2][j*COORD_DIM+0]=M0[j*6+2][k];
  2780. B[k+Ncoef*0][j*COORD_DIM+1]=M0[j*6+1][k];
  2781. B[k+Ncoef*1][j*COORD_DIM+1]=M0[j*6+3][k];
  2782. B[k+Ncoef*2][j*COORD_DIM+1]=M0[j*6+4][k];
  2783. B[k+Ncoef*0][j*COORD_DIM+2]=M0[j*6+2][k];
  2784. B[k+Ncoef*1][j*COORD_DIM+2]=M0[j*6+4][k];
  2785. B[k+Ncoef*2][j*COORD_DIM+2]=M0[j*6+5][k];
  2786. }
  2787. }
  2788. Matrix<Real> M1(Ncoef*COORD_DIM, COORD_DIM*Ngrid, SL3.begin()+i*COORD_DIM*Ncoef*COORD_DIM*Ngrid, false);
  2789. for(Long k=0;k<B.Dim(0);k++){ // Rearrange
  2790. for(Long j0=0;j0<COORD_DIM;j0++){
  2791. for(Long j1=0;j1<p0+1;j1++){
  2792. for(Long j2=0;j2<p0;j2++) M1[k][((j0*(p0+1)+ j1)*2+0)*p0+j2]=B[k][((j1*p0+j2)*2+0)*COORD_DIM+j0];
  2793. for(Long j2=0;j2<p0;j2++) M1[k][((j0*(p0+1)+p0-j1)*2+1)*p0+j2]=B[k][((j1*p0+j2)*2+1)*COORD_DIM+j0];
  2794. }
  2795. }
  2796. }
  2797. }
  2798. }
  2799. }
  2800. { // Transpose DL2
  2801. Long N=DL2.Dim()/(6*Ncoef*Ngrid);
  2802. DL3.ReInit(N*COORD_DIM*Ncoef*COORD_DIM*Ngrid);
  2803. #pragma omp parallel
  2804. {
  2805. Integer tid=omp_get_thread_num();
  2806. Integer omp_p=omp_get_num_threads();
  2807. Matrix<Real> B(COORD_DIM*Ncoef,Ngrid*COORD_DIM);
  2808. Long a=(tid+0)*N/omp_p;
  2809. Long b=(tid+1)*N/omp_p;
  2810. for(Long i=a;i<b;i++){
  2811. Matrix<Real> M0(Ngrid*6, Ncoef, DL2.begin()+i*Ngrid*6*Ncoef, false);
  2812. for(Long k=0;k<Ncoef;k++){ // Transpose
  2813. for(Long j=0;j<Ngrid;j++){ // TODO: needs blocking
  2814. B[k+Ncoef*0][j*COORD_DIM+0]=M0[j*6+0][k];
  2815. B[k+Ncoef*1][j*COORD_DIM+0]=M0[j*6+1][k];
  2816. B[k+Ncoef*2][j*COORD_DIM+0]=M0[j*6+2][k];
  2817. B[k+Ncoef*0][j*COORD_DIM+1]=M0[j*6+1][k];
  2818. B[k+Ncoef*1][j*COORD_DIM+1]=M0[j*6+3][k];
  2819. B[k+Ncoef*2][j*COORD_DIM+1]=M0[j*6+4][k];
  2820. B[k+Ncoef*0][j*COORD_DIM+2]=M0[j*6+2][k];
  2821. B[k+Ncoef*1][j*COORD_DIM+2]=M0[j*6+4][k];
  2822. B[k+Ncoef*2][j*COORD_DIM+2]=M0[j*6+5][k];
  2823. }
  2824. }
  2825. Matrix<Real> M1(Ncoef*COORD_DIM, COORD_DIM*Ngrid, DL3.begin()+i*COORD_DIM*Ncoef*COORD_DIM*Ngrid, false);
  2826. for(Long k=0;k<B.Dim(0);k++){ // Rearrange
  2827. for(Long j0=0;j0<COORD_DIM;j0++){
  2828. for(Long j1=0;j1<p0+1;j1++){
  2829. for(Long j2=0;j2<p0;j2++) M1[k][((j0*(p0+1)+ j1)*2+0)*p0+j2]=B[k][((j1*p0+j2)*2+0)*COORD_DIM+j0];
  2830. for(Long j2=0;j2<p0;j2++) M1[k][((j0*(p0+1)+p0-j1)*2+1)*p0+j2]=B[k][((j1*p0+j2)*2+1)*COORD_DIM+j0];
  2831. }
  2832. }
  2833. }
  2834. }
  2835. }
  2836. }
  2837. }
  2838. Profile::Toc();
  2839. Profile::Tic("Grid2SHC");
  2840. SphericalHarmonics<Real>::Grid2SHC(SL3, p0+1, 2*p0, p0, SL, SHCArrange::COL_MAJOR_NONZERO);
  2841. SphericalHarmonics<Real>::Grid2SHC(DL3, p0+1, 2*p0, p0, DL, SHCArrange::COL_MAJOR_NONZERO);
  2842. Profile::Toc();
  2843. }
  2844. } // end namespace