#!/bin/bash #$ -N fmm #$ -V # # Options for Lonestar #$ -q normal # $ -A eval $nodes_; eval $cores_; eval $mpi_proc_; eval $threads_; eval $testcase_; eval $n_pts_; eval $m_; eval $q_; eval $tol_; eval $depth_; eval $unif_; eval $adap_; eval $max_time_; eval $fname_; eval $args_; WORK_DIR=${SGE_O_WORKDIR} cd ${WORK_DIR} #export KMP_AFFINITY=verbose for (( k=0; k<${#nodes[@]}; k++ )) ; do if [ "${nodes[k]}" == "${NODES}" ] && [ "${mpi_proc[k]}" == "${MPI_PROC}" ]; then export OMP_NUM_THREADS=${threads[k]}; # CPU only EXEC_=${EXEC}; FNAME=${RESULT_DIR}/$(basename ${EXEC_})_${fname[k]}.out; if [ -f ${EXEC_} ] && [ ! -s ${FNAME} ] ; then printf '%*s\n\n' "100" ' ' | tr ' ' "#" | tee -a ${FNAME}; printf "COMMAND: ${EXEC_} ${args[k]}\n" | tee -a ${FNAME}; ${TIMEOUT} ${max_time[k]} time ibrun tacc_affinity ${EXEC_} ${args[k]} &> >(tee -a ${FNAME}); printf '\n%*s\n\n' "100" ' ' | tr ' ' "#" | tee -a ${FNAME}; fi; fi; done;